DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4c3 and cyp4f2

DIOPT Version :9

Sequence 1:NP_524598.1 Gene:Cyp4c3 / 43663 FlyBaseID:FBgn0015032 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_001016020.1 Gene:cyp4f2 / 548774 XenbaseID:XB-GENE-6258041 Length:528 Species:Xenopus tropicalis


Alignment Length:514 Identity:176/514 - (34%)
Similarity:282/514 - (54%) Gaps:40/514 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 TVFLLGSILIFLVVYNKRRSRLVKYIEKIPGPAAMPFLGNAIEMNVDHDELFNRVIGMQKLWGTR 94
            |:|.: :|.|:..:.|.||.|.      .|.|....:|...:.|.:..:|      |:.::....
 Frog    38 TIFKM-AIYIYAYIINARRLRC------FPEPPRRSWLLGHLGMFMPTEE------GLTEISSAI 89

  Fly    95 IGINR---VWQGTAPRVLLFEPETVEPILNSQKFVNKSHD--YDYLHPWLGEGLLTSTDRKWHSR 154
            ..:.|   .|.|..|.|.|..|:||:|::.:...:....:  |.:|.||||:|||.|...||...
 Frog    90 CNLRRTLLTWLGPIPEVSLVHPDTVKPVVAASAAIAPKDELFYGFLRPWLGDGLLLSRGEKWGQH 154

  Fly   155 RKILTPAFHFKILDDFIDVFNEQSAVLA---RKLAVEVGSEAFNLFPYVTLCTLDIVCETAMGRR 216
            |::|||||||.||.:::.:||:.:.::.   |:|..| |..:.::|.:|:|.|||.:.:....  
 Frog   155 RRLLTPAFHFDILKNYVKIFNQSTDIMLAKWRRLTAE-GPVSLDMFEHVSLMTLDTLLKCTFS-- 216

  Fly   217 IYAQSNSE--SEYVKAVYGIGSIVQSRQAKIWLQSDFIFSLTAEYKLHQSYINTLHGFSNMVIRE 279
             |.....|  |:|:.|:|.:.|:|..|:..:....|||::|::..:..:....|:|.|:..|:::
 Frog   217 -YDSDCQEKPSDYISAIYELSSLVVKREHYLPHHFDFIYNLSSNGRKFRQACKTVHEFTAGVVQQ 280

  Fly   280 RKAELAILQENNNNNNNNAPDAYDDVGKKKRLAFLD-LLIDASKEGTVLSNEDIREEVDTFMFEG 343
            ||   ..|||........:..     ||.|  .|:| ||:..:::|:.||:||:|.|||||||||
 Frog   281 RK---KALQEKGMEEWIKSKQ-----GKTK--DFIDILLLSKNEDGSQLSDEDMRAEVDTFMFEG 335

  Fly   344 HDTTSAAISWTLFLLGCHPEYQERVVEELDSIFGDDKETPATMKNLMDMRYLECCIKDSLRLFPS 408
            ||||::.:||.|:.|.|||||||:..:|:..:.............|..:.:...|||:||||.|.
 Frog   336 HDTTASGLSWILYNLACHPEYQEKCRKEITELLEGKDIKHLEWDELSKLPFTTMCIKESLRLHPP 400

  Fly   409 VPMMARMVGEDVNI-GGKIVPAGTQAIIMTYALHRNPRVFPKPEQFNPDNFLPENCAGRHPFAYI 472
            |..:.|...||:.: .|.|:|.|...||..:.:|.||.|:|.|:.::|..|.|||...|..:|::
 Frog   401 VVAVIRRCTEDIKLPKGDILPKGNCCIINIFGIHHNPDVWPNPQVYDPYRFDPENLQERSSYAFV 465

  Fly   473 PFSAGPRNCIGQKFAILEEKAVISTVLRKYKIEAVDRREDLTLLGELILRPKDGLRVKI 531
            ||||||||||||.||:.|.|.|::.:|..:::. :|..:.:....|||||.::||.:::
 Frog   466 PFSAGPRNCIGQNFAMAEMKIVLALILYNFQVR-LDETKTVRRKPELILRAENGLWLQV 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4c3NP_524598.1 p450 59..531 CDD:278495 168/483 (35%)
cyp4f2NP_001016020.1 p450 60..513 CDD:278495 163/473 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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