DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4c3 and cyp-25A3

DIOPT Version :9

Sequence 1:NP_524598.1 Gene:Cyp4c3 / 43663 FlyBaseID:FBgn0015032 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_001040850.1 Gene:cyp-25A3 / 4363046 WormBaseID:WBGene00014697 Length:502 Species:Caenorhabditis elegans


Alignment Length:580 Identity:141/580 - (24%)
Similarity:262/580 - (45%) Gaps:134/580 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LMAESILLSKVGQVISGYSPITVFLLGSILIFLVVYNKRRSRLVKYIEKIPGPAAMPFLGNAIEM 73
            |:..|||:|.|                |.:|::::..|.|.||...| .:.||.....:||..::
 Worm     4 LILTSILVSLV----------------SFIIYVILARKERFRLRGKI-GLSGPEPHWLMGNLKQI 51

  Fly    74 -----NVDHDELFNRVIGMQK--------LWGTRIGINRVWQGTAPRVLL-----FEPETVEPIL 120
                 .:.:|:.::....:.|        .:||::.||...:.....|.:     |...|..||:
 Worm    52 IERKAKLGYDDSYDWYNKLHKQFGETFGIYFGTQLNINITNEEDIKEVFIKNFSNFSDRTPPPII 116

  Fly   121 NSQKFVNKSHDYDYLHPWLGEGLLTST-DRKWHSRRKILTPAF------------HFKILDDFID 172
            ...|              |.|.||.:| :..|...|..:.|.|            |.|: |.|::
 Worm   117 EDNK--------------LKESLLQNTYESGWKHTRSAIAPIFSTGKMKAMHETIHSKV-DLFLE 166

  Fly   173 VFNEQSAVLARKLAVEVGSEAFNLFPYVTLCTLDIVCETAMGRRIYA-QSNSESE-----YVKAV 231
            :..|:::          ..:.::::......|||::     |:..:| .||.:.:     ||.|.
 Worm   167 ILKEKAS----------SGQKWDIYDDFQGLTLDVI-----GKCAFAIDSNCQRDRNDVFYVNAR 216

  Fly   232 YGIGSIVQSRQAKIWLQSDFIF-SLTAEYKLHQSYINTLHGFSNMVIRERKAELAILQENNNNNN 295
            ..|.:| ..|.:|| :.:.|:| .|:..:|:       |:.|:::.    |||:.::        
 Worm   217 KFITNI-DIRHSKI-ISTSFLFPELSKLWKV-------LYRFTDLA----KAEIPLV-------- 260

  Fly   296 NNAPDAYDDVGKKKR-------LAFLDLLI----DASKEGTVLSNEDIREEVDTFMFEGHDTTSA 349
                :...||.:::|       :..|.||:    |.||.   ::.:::.|....|:..|::|||.
 Worm   261 ----EGLADVYERRRGGEGSDSVDLLKLLLNREDDKSKP---MTKQEVIENCFAFLLAGYETTST 318

  Fly   350 AISWTLFLLGCHPEYQERVVEELDSIFGDDKETPA-TMKNLMDMRYLECCIKDSLRLFPSVPMMA 413
            |:::..:||..:|..|:::.||:    .:.||... |..::.:|:||:...|::||.:|.|...:
 Worm   319 AMTYCSYLLSKYPNVQQKLYEEI----MEAKENGGLTYDSIHNMKYLDYVYKETLRCYPPVIHFS 379

  Fly   414 -RMVGEDVNIGGKIVPAGTQAIIMTYALHRNPRVFPKPEQFNPDNFLPENCAGR-HPFAYIPFSA 476
             |...:|:.|.|:..|.|...:.:.:.:||||..:..||:|:|:.|  ||...: ....:|||..
 Worm   380 NRRCLKDITIRGQFYPKGAIVVCLPHTVHRNPENWDSPEEFHPERF--ENWEEKSSSLKWIPFGV 442

  Fly   477 GPRNCIGQKFAILEEKAVISTVLRKYKIEAVDRREDLTL-LGELILRPKDGLRVKITPRD 535
            |||.|:|.:||.:|.|..|:.:|..::::..:...||.. ...:|:||||.:|:.:.||:
 Worm   443 GPRYCVGMRFAEMEFKTTIAKLLDTFELKQFEGEADLIPDCNGVIMRPKDPVRLHLKPRN 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4c3NP_524598.1 p450 59..531 CDD:278495 126/524 (24%)
cyp-25A3NP_001040850.1 p450 37..496 CDD:278495 125/522 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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