DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4c3 and cyp20a1

DIOPT Version :9

Sequence 1:NP_524598.1 Gene:Cyp4c3 / 43663 FlyBaseID:FBgn0015032 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_998497.2 Gene:cyp20a1 / 406641 ZFINID:ZDB-GENE-040426-2646 Length:463 Species:Danio rerio


Alignment Length:531 Identity:107/531 - (20%)
Similarity:208/531 - (39%) Gaps:106/531 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 VFLLGSILIFLVVYNKRRSRLVKYIEKIPGPAAMPFLGNAIEMNVDHDELFNR------VIGMQK 89
            :.|:|::| :|...::|.|             .:|.|....|.:.:..::.|:      ::|:..
Zfish    13 IILIGAVL-YLYPSSRRAS-------------GVPGLNPTEEKDGNLQDIVNKGSLHEFLVGLHD 63

  Fly    90 LWGTRIGINRVWQGTAPRVLLFEPETVEPILNSQKFVNKSHDYDYLHPWL----------GEGLL 144
            .:|:   :...|.|..|.|      ::..:...::.:|.:...|.....|          |.||.
Zfish    64 EFGS---VASFWFGARPVV------SLGAVNQLRQHINPNWTTDSFETMLKSLLGYQSGSGVGLT 119

  Fly   145 TSTDRKWHSRRKILTPAFHFKILDDFIDVFNEQSAVLARKLAVEVGSEAFNLFPYVTLCTLDIVC 209
            .|..||     |:...|.: |.|::...:..:|...|..|.|....|:...|..::....:..|.
Zfish   120 ESMMRK-----KVYEGAIN-KTLENNFPLLLQQVEELVDKWASYPKSQHMPLCAHLLGLAMKAVT 178

  Fly   210 ETAMGRR-------IYAQSNSE---SEYVKAVYGIGSIVQSRQAKIWLQSDFIFSLTAEYKLHQS 264
            :.|||.|       |..:.|.|   ||..|. |..||:.:|...|            |.|   :|
Zfish   179 QLAMGSRFRDDAEVIRFRKNHEAIWSEIGKG-YLDGSLEKSSSRK------------AHY---ES 227

  Fly   265 YINTLHGFSNMVIRERKAELAILQENNNNNNNNAPDAYDDVGKKKRLAFLDLLIDASKEGTVLSN 329
            .:..:......|.::|..:                       ...:.:|::.|:.|:     |:.
Zfish   228 ALAEMESVLKSVAKQRPGQ-----------------------GSSQSSFVNYLLQAN-----LTE 264

  Fly   330 EDIREEVDTFMFEGHDTTSAAISWTLFLLGCHPEYQERVVEELDSIFGDDKETPATMKNLMDMRY 394
            ..:.|:...|...|...|:....|.:..|......|:|:..||..:.||:   |.:::.:..:||
Zfish   265 RQVMEDGMVFTLAGCVITANLCIWAVHFLSVSEAVQDRLYHELVEVLGDE---PVSLEKIPQLRY 326

  Fly   395 LECCIKDSLRLFPSVPMMARMVGEDVNIGGKIVPAGTQAIIMTYALHRNPRVFPKPEQFNPDNFL 459
            .:..:.:::|.....|:.||:...:..:...::|..|..|.....:.::...:..|.:||||.|.
Zfish   327 CQQVLNETVRTAKLTPVAARLQEVEGKVDQHVIPKETLVIYALGVVLQDADTWSLPYRFNPDRFA 391

  Fly   460 PENCAGRHPFAYIPFSAGPRNCIGQKFAILEEKAVISTVLRKYKIEAVDRREDLTLLGELILRPK 524
            .|:.  ...|:.:.|| |.:.|...:||......::||::|:.::..|| .:.:....||:..||
Zfish   392 EESV--MKSFSLLGFS-GSQACPELRFAYTVATVLLSTLVRRLRMHRVD-GQVVEARYELVTTPK 452

  Fly   525 DGLRVKITPRD 535
            |...:.::.|:
Zfish   453 DDTWITVSKRN 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4c3NP_524598.1 p450 59..531 CDD:278495 100/497 (20%)
cyp20a1NP_998497.2 p450 43..452 CDD:299894 94/474 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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