DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4c3 and cyp46a1.2

DIOPT Version :9

Sequence 1:NP_524598.1 Gene:Cyp4c3 / 43663 FlyBaseID:FBgn0015032 Length:535 Species:Drosophila melanogaster
Sequence 2:XP_009292815.1 Gene:cyp46a1.2 / 393433 ZFINID:ZDB-GENE-040426-1184 Length:501 Species:Danio rerio


Alignment Length:528 Identity:144/528 - (27%)
Similarity:240/528 - (45%) Gaps:72/528 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 ITVFLLGSILIFLVVYNKRRSRLVKYIEKIPGPAAMPF-LGNAIEM--------NVDHDELFNRV 84
            |..:||.::....:.|......|.:..:.||||....| ||::..:        ::.|| ||.: 
Zfish     9 IIFYLLSAVFTAFLAYCLYIHHLHQKYDHIPGPPRDNFLLGHSPSLTKAMYSDDSLIHD-LFLQ- 71

  Fly    85 IGMQKLWGTRIG-INRVWQGTAPRVLLFEPETVEPILNSQKFVNKSHDYDYL-----HPWLGEGL 143
                  |..:.| :.|:.......:|:..||..:.||.|.|:......|..|     ..:||.||
Zfish    72 ------WAEKYGPVYRINTLHYIAILVHCPEATKTILMSPKYAKDPFSYSRLFNLFGKRFLGNGL 130

  Fly   144 LTSTDRK-WHSRRKILTPAFHFKILDDFIDVFNEQSAVLARKLAVEVGSEAFN------LFPYVT 201
            :|:.|.. |:.:|:|:.|||....|...|..|:|.|..|..||     .|..|      :...|.
Zfish   131 VTAVDHDIWYRQRRIMDPAFSSSYLRSLISTFDEMSERLMDKL-----EEMANNKTPAVMHDLVN 190

  Fly   202 LCTLDIVCETAMGRRIYAQSNSESEYVKAVYGI--GSIVQSRQAKIWLQSDFIFSL-TAEYKLHQ 263
            ..|||::|:.|.|..:...:..:|.:..|:...  |..:.:|        |.:|.: ...:||.|
Zfish   191 CVTLDVICKVAFGVDLNFLTQKDSPFQNAIELCLNGMALDAR--------DPLFRIFPKNWKLIQ 247

  Fly   264 SYINTLHGFSNMVIRERKAELAILQENNNNNNNNAPDAYDDVGKKKRLAFLDLLIDASKEGTVLS 328
            .            ||:....|....|....|...|....:||.|.    .|..::..::|..|.|
Zfish   248 Q------------IRDAAVLLRKTGEKWIQNRKTAVKNGEDVPKD----ILTQILKIAEEENVNS 296

  Fly   329 NEDIREEVD---TFMFEGHDTTSAAISWTLFLLGCHPEYQERVVEELDSIFGDDKETPATMKNLM 390
            :||:.:.:|   ||...|.:||:..:|:.:..||.:||..:|...|:|.:.|..:|  .:.::|.
Zfish   297 SEDLEQMMDNFVTFFIAGQETTANQLSFAIMALGRNPEIYKRAKAEVDEVLGTKRE--ISNEDLG 359

  Fly   391 DMRYLECCIKDSLRLFPSVPMMARMVGEDVNIGGKIVPAGTQAIIMTYALHRNPRVFPKPEQFNP 455
            .:.||...:|::|||:|:.|...|.:.||:.|.|..:|.|...:..::...|..:.|..|.:|:|
Zfish   360 KLTYLSQVLKETLRLYPTAPGTNRWLHEDMIINGIKIPGGCSVMFSSFVSQRLEKFFKDPLKFDP 424

  Fly   456 DNFLPENCAGRHPFAYIPFSAGPRNCIGQKFAILEEKAVISTVLRKYKIEAVDRRE-DLTLLGEL 519
            :.| .|| |.:..:.|.||:.|||.|:||.|:.:|.|.|::.:|::::...|..:. |:...|  
Zfish   425 ERF-DEN-APKPYYCYYPFALGPRTCLGQVFSQMEAKVVLAKLLQRFEFSLVPGQSFDIKDTG-- 485

  Fly   520 ILRPKDGL 527
            .||||.|:
Zfish   486 TLRPKSGV 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4c3NP_524598.1 p450 59..531 CDD:278495 138/498 (28%)
cyp46a1.2XP_009292815.1 p450 39..495 CDD:278495 138/498 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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