DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4c3 and cyp26a1

DIOPT Version :9

Sequence 1:NP_524598.1 Gene:Cyp4c3 / 43663 FlyBaseID:FBgn0015032 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_571221.2 Gene:cyp26a1 / 30381 ZFINID:ZDB-GENE-990415-44 Length:492 Species:Danio rerio


Alignment Length:548 Identity:120/548 - (21%)
Similarity:214/548 - (39%) Gaps:105/548 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 YSPITVFL---LGSILIFLVVYNKRRSRLVKYIEK------IPGPAAMPFLGNAIEMNVDHDELF 81
            |:.:..||   :..:|:||.........:::.::.      .||...:||:|..:::.:...:..
Zfish     4 YTLMVTFLCTIVLPVLLFLAAVKLWEMLMIRRVDPNCRSPLPPGTMGLPFIGETLQLILQRRKFL 68

  Fly    82 NRVIGMQK---LWGTRIGINRVWQGTAPRVLLFEPETVEPI-LNSQKFVNKSHDYDYLHPW---- 138
            .  :..||   ::.|.:..|       |.|.:...:.|..| |...|.|:..        |    
Zfish    69 R--MKRQKYGCIYKTHLFGN-------PTVRVMGADNVRQILLGEHKLVSVQ--------WPASV 116

  Fly   139 ---LGEGLLTSTDRKWH-SRRKILTPAFHFKILDDFIDVFNEQ--SAV---LARKLAVEVGSEAF 194
               ||...|::.....| :::|.:..||....|:.:|.|..::  ||:   |.:...|.|     
Zfish   117 RTILGSDTLSNVHGVQHKNKKKAIMRAFSRDALEHYIPVIQQEVKSAIQEWLQKDSCVLV----- 176

  Fly   195 NLFPYVTLCTLDIVCETAMGRRIYAQSNSESEYVKAVYGIGSIVQSRQAKIWLQSDFIFSLTAEY 259
              :|.:......|.....:|.........|.|.|:|   ...::::           :|||..:.
Zfish   177 --YPEMKKLMFRIAMRILLGFEPEQIKTDEQELVEA---FEEMIKN-----------LFSLPIDV 225

  Fly   260 KLHQSY-----INTLHGFSNMVIRERKAELAILQENNNNNNNNAPDAYDDVGKKKRLAFLDLLID 319
            .....|     .|.:|......||::      :|:::|.|.....||            |.|||:
Zfish   226 PFSGLYRGLRARNFIHSKIEENIRKK------IQDDDNENEQKYKDA------------LQLLIE 272

  Fly   320 ASKEG-TVLSNEDIREEVDTFMFEGHDTTSAAISWTLFLLGCHPEYQERVVEELDSIFGDDKETP 383
            .|:.. ...|.:.::|.....:|.||:||::..:..:..||.:.|..::|.||:.........||
Zfish   273 NSRRSDEPFSLQAMKEAATELLFGGHETTASTATSLVMFLGLNTEVVQKVREEVQEKVEMGMYTP 337

  Fly   384 A---TMKNLMDMRYLECCIKDSLRLFPSVPMMARMVGEDVNIGGKIVPAGTQAIIMTYALHRNPR 445
            .   :|:.|..::|..|.||::||:.|.||...|:..:...:.|..:|.|...|......|....
Zfish   338 GKGLSMELLDQLKYTGCVIKETLRINPPVPGGFRVALKTFELNGYQIPKGWNVIYSICDTHDVAD 402

  Fly   446 VFPKPEQFNPDNFLPENCAGRHPFAYIPFSAGPRNCIGQKFAILEEKAVISTVLRKYKIEAVDRR 510
            |||..::|.|:.|:.:.......|.||||..|.|.|:|::||        ..:|:.:.:|.....
Zfish   403 VFPNKDEFQPERFMSKGLEDGSRFNYIPFGGGSRMCVGKEFA--------KVLLKIFLVELTQHC 459

  Fly   511 EDLTLLGELILR------PKDGLRVKIT 532
            ..:...|...::      |.|.|..|.|
Zfish   460 NWILSNGPPTMKTGPTVYPVDNLPTKFT 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4c3NP_524598.1 p450 59..531 CDD:278495 112/503 (22%)
cyp26a1NP_571221.2 p450 14..487 CDD:299894 116/536 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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