DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4c3 and Cyp4a3

DIOPT Version :10

Sequence 1:NP_524598.1 Gene:Cyp4c3 / 43663 FlyBaseID:FBgn0015032 Length:535 Species:Drosophila melanogaster
Sequence 2:XP_038965516.1 Gene:Cyp4a3 / 298423 RGDID:631356 Length:511 Species:Rattus norvegicus


Alignment Length:521 Identity:172/521 - (33%)
Similarity:277/521 - (53%) Gaps:46/521 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 ITVFLLGSIL--IFLVVYNK-----RRSRLVKYIEKIPGPAAMPFLGNAIEMNVDHDELFNRVIG 86
            ::.|..|:.|  :|||::..     ||..|:|.:||.|...:....|:.::     |..|.:|: 
  Rat    15 VSGFFQGAFLLSLFLVLFKAVQFYLRRQWLLKALEKFPSTPSHWLWGHDLK-----DREFQQVL- 73

  Fly    87 MQKLWGTRI-GINRVW-QGTAPRVLLFEPETVEPILNSQKFVNKSHDYDYLHPWL----GEGLLT 145
               .|..:. |....| .|:..||||::|:.|:.:| .:.....|..|.:|.||:    |.|||.
  Rat    74 ---TWVEKFPGACLQWLSGSKTRVLLYDPDYVKVVL-GRSDPKASGIYQFLAPWIVSGTGYGLLL 134

  Fly   146 STDRKWHSRRKILTPAFHFKILDDFIDVFNEQSAVLARKL-AVEVGSEAFNLFPYVTLCTLDIVC 209
            ...:||....::||||||:.||..::.:..:..:::..|. .::.......:|.||:|.|||.|.
  Rat   135 LNGKKWFQHWRMLTPAFHYGILKPYVKIMADSVSIMLDKWEKLDDQDHPLEIFHYVSLMTLDTVM 199

  Fly   210 ETAMGRR--IYAQSNSESEYVKAVYGIGSIVQSRQAKIWLQSDFIFSLTAEYKLHQSYINTLHGF 272
            :.|...:  :....||.| |.|||..:.::...|....:..:..|::::::.:|.:......|..
  Rat   200 KCAFSHQGSVQLDVNSRS-YTKAVEDLNNLTFFRVRSAFYGNSIIYNMSSDGRLSRRACQIAHEH 263

  Fly   273 SNMVIRERKAELAILQENNNNNNNNAPDAYDDVGKKKRLAFLDLLIDASKE-GTVLSNEDIREEV 336
            ::.||:.|||:|...:|            .....||:.|.|||:|:.|..| |..||:||:|.||
  Rat   264 TDGVIKMRKAQLQNEEE------------LQKARKKRHLDFLDILLFAKMEDGKSLSDEDLRAEV 316

  Fly   337 DTFMFEGHDTTSAAISWTLFLLGCHPEYQERVVEELDSIFGDDKETPATMKNLMDMRYLECCIKD 401
            |||||||||||::.|||..:.|..|||:|||..||:.||.||.  |..|..:|..:.|...|||:
  Rat   317 DTFMFEGHDTTASGISWVFYALATHPEHQERCREEVQSILGDG--TSVTWDHLDQISYTTMCIKE 379

  Fly   402 SLRLFPSVPMMARMVGEDVNI-GGKIVPAGTQAIIMTYALHRNPRVFPKPEQFNPDNFLPENCAG 465
            :|||:|.||.::|.:...|.. .|:.:|.|....|:.|.||.||..:|.|:.|:|..|.|:  :.
  Rat   380 ALRLYPPVPSVSRELSSPVTFPDGRSIPKGITTTILIYGLHHNPSYWPNPKVFDPSRFSPD--SP 442

  Fly   466 RHPFAYIPFSAGPRNCIGQKFAILEEKAVISTVLRKYKIEAVDRREDLTLLGELILRPKDGLRVK 530
            ||..||:|||.|.|||||::||:.|.|..::..|.::::.....|..:. :..|:|:.|:|:.::
  Rat   443 RHSHAYLPFSGGARNCIGKQFAMNELKVAVALTLLRFELLPDPTRIPVP-MARLVLKSKNGIHLR 506

  Fly   531 I 531
            :
  Rat   507 L 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4c3NP_524598.1 CYP4V-like 96..529 CDD:410753 154/442 (35%)
Cyp4a3XP_038965516.1 CYP4B-like 69..506 CDD:410771 157/459 (34%)

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