DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4c3 and Cyp4v3

DIOPT Version :9

Sequence 1:NP_524598.1 Gene:Cyp4c3 / 43663 FlyBaseID:FBgn0015032 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_001129072.1 Gene:Cyp4v3 / 266761 RGDID:708530 Length:525 Species:Rattus norvegicus


Alignment Length:532 Identity:251/532 - (47%)
Similarity:348/532 - (65%) Gaps:25/532 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LMAESILLSKVGQVISGYSPITVFLLGSILIFLVVYNKRRSRLVKYIEKIPGPA-AMPFLGNAIE 72
            |..:.:||......:| .:..||.|  :||..||.|    :|..:.:..||..| |.|.:|:|:.
  Rat     8 LSGQKLLLWGAASAVS-VAGATVLL--NILQMLVSY----ARKWQQMRPIPSVARAYPLVGHALF 65

  Fly    73 MNVDHDELFNRVIGMQKLWGTRIGINRVWQGTAPRVLLFEPETVEPILNSQKFVNKSHDYDYLHP 137
            |..::.|.|.::|...:.: ..:.|.::|.|..|.|.|::.|.||.||.|.|.::||..|.:|.|
  Rat    66 MKPNNTEFFQQIIQYTEEF-RHLPIIKLWIGPVPLVALYKAENVEVILTSSKQIDKSFMYKFLQP 129

  Fly   138 WLGEGLLTSTDRKWHSRRKILTPAFHFKILDDFIDVFNEQSAVLARKLAVEVGSEAFNLFPYVTL 202
            |||.||||||..||.:|||:|||:|||.||:||:||.|||:.:|..||...|..||||.|..:||
  Rat   130 WLGLGLLTSTGSKWRARRKMLTPSFHFTILEDFLDVMNEQANILVNKLEKHVNQEAFNCFFPITL 194

  Fly   203 CTLDIVCETAMGRRIYAQSNSESEYVKAVYGIGSIVQSRQAKIWLQSDFIFSLTAEYKLHQSYIN 267
            |.|||:||||||:.|.||||.:||||:.||.:..::..|....|...|..:.:..|.:.|:..:.
  Rat   195 CALDIICETAMGKNIGAQSNGDSEYVRTVYRMSDMIYRRMKMPWFWFDLWYLMFKEGRDHKKGLK 259

  Fly   268 TLHGFSNMVIRE----RKAELAILQENNNNNNNNAPDAYDDVGKKKRLAFLDLLIDAS-KEGTVL 327
            :||.|:|.||.|    ||||    |:.........|      .|.||.||||||:..: :||..|
  Rat   260 SLHTFTNNVIAERVNARKAE----QDCIGAGRGPLP------SKTKRKAFLDLLLSVTDEEGNKL 314

  Fly   328 SNEDIREEVDTFMFEGHDTTSAAISWTLFLLGCHPEYQERVVEELDSIFGDDKETPATMKNLMDM 392
            |:||||||||||||||||||:|||:|:|:|||.:||.|.:|.:|||.:|| ....|.|:::|..:
  Rat   315 SHEDIREEVDTFMFEGHDTTAAAINWSLYLLGSNPEVQRKVDKELDDVFG-RSHRPVTLEDLKKL 378

  Fly   393 RYLECCIKDSLRLFPSVPMMARMVGEDVNIGGKIVPAGTQAIIMTYALHRNPRVFPKPEQFNPDN 457
            :||:|.||::||:|||||:.||.:.||..:.|..:..||:|:|:.|||||:||.||.||:|.|:.
  Rat   379 KYLDCVIKETLRVFPSVPLFARSLSEDCEVAGYKISKGTEAVIIPYALHRDPRYFPDPEEFQPER 443

  Fly   458 FLPENCAGRHPFAYIPFSAGPRNCIGQKFAILEEKAVISTVLRKYKIEAVDRREDLTLLGELILR 522
            |.|||..||||:||:|||||||||||||||::|||.:::.:||::.||:..:||:|.|.|:||||
  Rat   444 FFPENSQGRHPYAYVPFSAGPRNCIGQKFAVMEEKTILACILREFWIESNQKREELGLAGDLILR 508

  Fly   523 PKDGLRVKITPR 534
            |.:|:.:|:..|
  Rat   509 PNNGIWIKLKRR 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4c3NP_524598.1 p450 59..531 CDD:278495 235/477 (49%)
Cyp4v3NP_001129072.1 CYP4V 76..515 CDD:410773 226/450 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166348388
Domainoid 1 1.000 456 1.000 Domainoid score I474
eggNOG 1 0.900 - - E33208_3B9GY
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H133054
Inparanoid 1 1.050 465 1.000 Inparanoid score I1480
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 1 1.000 - - oto96919
orthoMCL 1 0.900 - - OOG6_100014
Panther 1 1.100 - - O PTHR24291
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X23
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1413.800

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