DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4c3 and Cyp4f6

DIOPT Version :9

Sequence 1:NP_524598.1 Gene:Cyp4c3 / 43663 FlyBaseID:FBgn0015032 Length:535 Species:Drosophila melanogaster
Sequence 2:XP_006241111.1 Gene:Cyp4f6 / 266689 RGDID:708365 Length:538 Species:Rattus norvegicus


Alignment Length:551 Identity:192/551 - (34%)
Similarity:293/551 - (53%) Gaps:59/551 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 MAESILLSKVGQVISGYSPITVFLLGS-------ILIFLVVYNKRRSRLVKYIEKIPGPAAMPFL 67
            |...:.||::|......||..:.|||.       ||.::..:.....|| :...:.|.|:.  |.
  Rat     1 MMLQLSLSRLGMGSLTASPWHLLLLGGASWILARILAWIYTFYDNCCRL-RCFPQPPKPSW--FW 62

  Fly    68 GNAIEMNVDHDELFNRVIGMQKLWGTRIG-----INRVWQGTA-PRVLLFEPETVEPILNSQKFV 126
            |:...|.       |...|||.:  ..:|     |:..|.|.. |.:.|..|..:.|:|.:...|
  Rat    63 GHLTLMK-------NNEEGMQFI--AHLGRNFRDIHLSWVGPVYPILRLVHPNVIAPLLQASAAV 118

  Fly   127 --NKSHDYDYLHPWLGEGLLTSTDRKWHSRRKILTPAFHFKILDDFIDVFNEQSAVLARK---LA 186
              .:...|.:|.||||:|||.|...||:..|::|||||||.||..::.:||:....:..|   |.
  Rat   119 APKEMTLYGFLKPWLGDGLLMSAGEKWNHHRRLLTPAFHFDILKSYVKIFNKSVNTMHAKWQRLT 183

  Fly   187 VEVGSEAFNLFPYVTLCTLDIVCETAMGRRIYA-QSN---SESEYVKAVYGIGSIVQSRQAKIWL 247
            .: ||...::|.:::|.|||     ::.:.|:: .||   |.|||:.|:..:.|::..||.:.:|
  Rat   184 AK-GSARLDMFEHISLMTLD-----SLQKCIFSFDSNCQESNSEYIAAILELSSLIVKRQRQPFL 242

  Fly   248 QSDFIFSLTAEYKLHQSYINTLHGFSNMVIRERKAELAILQENNNNNNNNAPDAYDDVGKKKRLA 312
            ..||::.|||:.:..:...:.:|.|::.|||||::.|         |.....:......|.|.|.
  Rat   243 YLDFLYYLTADGRRFRKACDVVHNFTDAVIRERRSTL---------NTQGVDEFLKARAKTKTLD 298

  Fly   313 FLDLLIDASKE-GTVLSNEDIREEVDTFMFEGHDTTSAAISWTLFLLGCHPEYQERVVEELDSIF 376
            |:|:|:.|..| |..||:.|||.|.|||||.|||||::|:||.|:.|..|||||||..:|:..:.
  Rat   299 FIDVLLLAKDEHGKGLSDVDIRAEADTFMFGGHDTTASALSWILYNLARHPEYQERCRQEVRELL 363

  Fly   377 GDDKETPATMKNLMDMRYLECCIKDSLRLFPSVPMMARMVGEDVNI-GGKIVPAGTQAIIMTYAL 440
            .|.:.......:|..:.:|..|||:||||.|.|.:::|...:|:.: .|:::|.|...:|..:.:
  Rat   364 RDREPEEIEWDDLAQLPFLTMCIKESLRLHPPVLLISRCCSQDIVLPDGRVIPKGNICVISIFGV 428

  Fly   441 HRNPRVFPKPEQFNPDNFLPENCAGRHPFAYIPFSAGPRNCIGQKFAILEEKAVISTVLRKYKIE 505
            |.||.|:|.||.:||..|.|||...|.|.|:|||||||||||||.||:.|.|..::..|.::.:.
  Rat   429 HHNPSVWPDPEVYNPFRFDPENPQKRSPLAFIPFSAGPRNCIGQTFAMSEIKVALALTLLRFCVL 493

  Fly   506 AVD---RREDLTLLGELILRPKDGLRVKITP 533
            ..|   ||:.     |||||.:.||.:::.|
  Rat   494 PDDKEPRRKP-----ELILRAEGGLWLRVEP 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4c3NP_524598.1 p450 59..531 CDD:278495 178/491 (36%)
Cyp4f6XP_006241111.1 p450 53..515 CDD:278495 178/492 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166348427
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9GY
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X23
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.650

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