DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4c3 and Cyp4a8

DIOPT Version :9

Sequence 1:NP_524598.1 Gene:Cyp4c3 / 43663 FlyBaseID:FBgn0015032 Length:535 Species:Drosophila melanogaster
Sequence 2:XP_038965258.1 Gene:Cyp4a8 / 266674 RGDID:628846 Length:510 Species:Rattus norvegicus


Alignment Length:521 Identity:164/521 - (31%)
Similarity:279/521 - (53%) Gaps:41/521 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 ISGYSPITVFLLGSILIFLVV-YNKRRSRLVKYIEKIPGPAAMPFLGNAIEMNVDHD--ELFNRV 84
            |.|:..|...|...:|:|... :...|..|::..::.|.|.:..|.|:.:...||.:  ::..||
  Rat    15 ILGFLQIATVLTVLLLLFKTAQFYLHRRWLLRATQQFPSPPSHWFFGHKLSFLVDQEFQDILTRV 79

  Fly    85 IGM-----QKLWGTRIGINRVWQGTAPRVLLFEPETVEPILNSQKFVNKSHDYDYLHPWLGEGLL 144
            ...     |.|||:.:           |:.:::|:.::.|| .:......|.|.:|.||:|.|||
  Rat    80 KNFPSACPQWLWGSNV-----------RIQVYDPDYMKLIL-GRSDPKSHHSYRFLAPWIGYGLL 132

  Fly   145 TSTDRKWHSRRKILTPAFHFKILDDFIDVFNEQSAVLARKLAVEVGSEA-FNLFPYVTLCTLDIV 208
            ....:.|...|::||||||:..|..::.:..:...::..|....||.:: ..:|.::||.|||.:
  Rat   133 LLNGQTWFQHRRMLTPAFHYDTLKPYVGIMADSVRIMLDKWEQIVGQDSTLEIFQHITLMTLDTI 197

  Fly   209 CETAMGRRIYAQSNSE-SEYVKAVYGIGSIVQSRQAKIWLQSDFIFSLTAEYKLHQSYINTLHGF 272
            .:.|..:....|.:.: ..|:|||..:.::...|...|:.|:|.|:||::..:..:|.....|..
  Rat   198 MKCAFSQEGSVQLDRKYKSYIKAVEDLNNLSFFRIRNIFHQNDIIYSLSSNGRKARSAWQLAHEH 262

  Fly   273 SNMVIRERKAELAILQENNNNNNNNAPDAYDDVGKKKRLAFLDLLIDASKE-GTVLSNEDIREEV 336
            ::.||:.|||:|...:|            ...|.:|:||.|||:|:.|..| |:.||::|:|.||
  Rat   263 TDQVIKSRKAQLQDEEE------------LQKVKQKRRLDFLDILLFARIENGSSLSDKDLRAEV 315

  Fly   337 DTFMFEGHDTTSAAISWTLFLLGCHPEYQERVVEELDSIFGDDKETPATMKNLMDMRYLECCIKD 401
            |||||||||||::.|||..:.|..:||:|:...:|:.|:.||.  ...|..:|..|.|...|||:
  Rat   316 DTFMFEGHDTTASGISWIFYALATNPEHQQGCRKEIQSLLGDG--ASITWDDLDKMPYTTMCIKE 378

  Fly   402 SLRLFPSVPMMARMVGEDVNI-GGKIVPAGTQAIIMTYALHRNPRVFPKPEQFNPDNFLPENCAG 465
            :||::|.|..::||:...|.. .|:.:|.|...::..|.||.||.|:|.||.|:|..|.||  :.
  Rat   379 ALRIYPPVTAVSRMLSTPVTFPDGRSLPKGITVMLSFYGLHHNPTVWPNPEVFDPYRFAPE--SS 441

  Fly   466 RHPFAYIPFSAGPRNCIGQKFAILEEKAVISTVLRKYKIEAVDRREDLTLLGELILRPKDGLRVK 530
            ||..:::|||.|.|||||::||:.|.|..::..|.::::.....|..:. :..|:|:.|:|:.::
  Rat   442 RHSHSFLPFSGGARNCIGKQFAMNELKVAVALTLLRFELLPDPTRIPIP-IPRLVLKSKNGIYLR 505

  Fly   531 I 531
            :
  Rat   506 L 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4c3NP_524598.1 p450 59..531 CDD:278495 156/482 (32%)
Cyp4a8XP_038965258.1 CYP4B-like 72..505 CDD:410771 150/461 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166348411
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9GY
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X23
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.650

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