DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4c3 and Cyp4a2

DIOPT Version :9

Sequence 1:NP_524598.1 Gene:Cyp4c3 / 43663 FlyBaseID:FBgn0015032 Length:535 Species:Drosophila melanogaster
Sequence 2:XP_038965182.1 Gene:Cyp4a2 / 24306 RGDID:2479 Length:517 Species:Rattus norvegicus


Alignment Length:541 Identity:178/541 - (32%)
Similarity:283/541 - (52%) Gaps:64/541 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 SGYSP------ITVFLLGSIL--IFLVVYNK-----RRSRLVKYIEKIPGPAAMPFLGNAIEMNV 75
            |.:||      ::.|..|:.|  :|||::..     ||..|:|.:||.|...:....|:.::   
  Rat     4 SVFSPTRSLDGVSGFFQGAFLLSLFLVLFKAVQFYLRRQWLLKALEKFPSTPSHWLWGHNLK--- 65

  Fly    76 DHDELFNRVIGMQKLWGTRI-GINRVW-QGTAPRVLLFEPETVEPILNSQKFVNKSHDYDYLHPW 138
              |..|.:|:    .|..:. |....| .|:..||||::|:.|:.:|..    :....|..|.||
  Rat    66 --DREFQQVL----TWVEKFPGACLQWLSGSTARVLLYDPDYVKVVLGR----SDPKPYQSLAPW 120

  Fly   139 LGEGLLTSTDRKWHSRRKILTPAFHFKILDDFIDVFNEQSAVLARKL-AVEVGSEAFNLFPYVTL 202
            :|.|||....:||...|::||||||:.||..::.:..:..:::..|. .::.......:|.||:|
  Rat   121 IGYGLLLLNGKKWFQHRRMLTPAFHYDILKPYVKIMADSVSIMLDKWEKLDDQDHPLEIFHYVSL 185

  Fly   203 CTLDIVCETAMGRR--IYAQSNSESEYVKAVYGIGSIVQSRQAKIWLQSDFIFSLTAEYKL---- 261
            .|||.|.:.|...:  :....||.| |.|||..:.:::..|....:..:..|::::::.:|    
  Rat   186 MTLDTVMKCAFSHQGSVQLDVNSRS-YTKAVEDLNNLIFFRVRSAFYGNSIIYNMSSDGRLSRRA 249

  Fly   262 ------HQSYINTLHGF---SNMVIRERKAELAILQENNNNNNNNAPDAYDDVGKKKRLAFLDLL 317
                  |...:..|..|   |:.||:.|||:|...:|            .....||:.|.|||:|
  Rat   250 CQIAHEHTGSVFLLPAFLSLSDGVIKTRKAQLQNEEE------------LQKARKKRHLDFLDIL 302

  Fly   318 IDASKE-GTVLSNEDIREEVDTFMFEGHDTTSAAISWTLFLLGCHPEYQERVVEELDSIFGDDKE 381
            :.|..| |..||:||:|.|||||||||||||::.|||..:.|..|||:|||..||:.||.||.  
  Rat   303 LFAKMEDGKSLSDEDLRAEVDTFMFEGHDTTASGISWVFYALATHPEHQERCREEVQSILGDG-- 365

  Fly   382 TPATMKNLMDMRYLECCIKDSLRLFPSVPMMARMVGEDVNI-GGKIVPAGTQAIIMTYALHRNPR 445
            |..|..:|..|.|...|||::|||:..||.::|.:...|.. .|:.:|.|.:..|:.|.||.||.
  Rat   366 TSVTWDHLDQMPYTTMCIKEALRLYSPVPSVSRELSSPVTFPDGRSIPKGIRVTILIYGLHHNPS 430

  Fly   446 VFPKPEQFNPDNFLPENCAGRHPFAYIPFSAGPRNCIGQKFAILEEKAVISTVLRKYKIEAVDRR 510
            .:|.|:.|:|..|.|:  :.||..||:|||.|.|||||::||:.|.|..::..|.::::.....|
  Rat   431 YWPNPKVFDPSRFSPD--SPRHSHAYLPFSGGARNCIGKQFAMNELKVAVALTLLRFELLPDPTR 493

  Fly   511 EDLTLLGELILRPKDGLRVKI 531
            ..:. :..|:|:.|:|:.:::
  Rat   494 IPVP-MPRLVLKSKNGIHLRL 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4c3NP_524598.1 p450 59..531 CDD:278495 163/491 (33%)
Cyp4a2XP_038965182.1 CYP4B-like 69..512 CDD:410771 160/468 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166348410
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9GY
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X23
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.650

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