DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4c3 and cyp-13A8

DIOPT Version :9

Sequence 1:NP_524598.1 Gene:Cyp4c3 / 43663 FlyBaseID:FBgn0015032 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_496115.1 Gene:cyp-13A8 / 188358 WormBaseID:WBGene00011674 Length:509 Species:Caenorhabditis elegans


Alignment Length:574 Identity:137/574 - (23%)
Similarity:240/574 - (41%) Gaps:147/574 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 ILIFLVVYN-------KRRSRLVKYIEKIPGPAAMPFLGNAIEMNVD--------------HDEL 80
            |||.:|.|.       |||.        :|||..:|..|.|..|..|              :.::
 Worm     6 ILISIVTYYFWHWTFWKRRG--------LPGPWGVPIFGKAGAMLEDSFPPGYTLQKWTKEYGKI 62

  Fly    81 FNRVIGMQKLWGTRIGINRVWQGTAPRVLLFEPETVEPILNSQ--KFVNKSH---------DYDY 134
            :....||||:                 :::.:|:.|:.||..|  .|..:.|         |.| 
 Worm    63 YGFTEGMQKV-----------------MVISDPDLVQEILVKQYDNFYGRKHNPVQGDPDKDKD- 109

  Fly   135 LHPWLGEGLLTSTDRKWHSRRKILTPAFHFKILDDFIDVFNEQSAVLARKLAVE-VGSEAFNLFP 198
            :|....:|.      :|...|.|..|||....:...:....:.:..|.:||..| ...:|.|:..
 Worm   110 IHIVGAQGF------RWKRLRTITAPAFSNGSIKKVLTTMEDSTQELMKKLREESENGKAVNMHL 168

  Fly   199 YVTLCTLDIVCETAMGRRIYAQSNSE---SEYVKAVYGIGSIVQSRQAKIWLQS-DFIFSLTAEY 259
            :....|.|::...|||     |.:|:   :..:|.|.|   ..:..:.:||:.| .|.|::    
 Worm   169 FYQEYTFDVISRVAMG-----QPDSQMFKNPLLKDVKG---FFEHNRWQIWMFSGGFPFAV---- 221

  Fly   260 KLHQSYINTL------HGFSNMVIRERKAELAIL-----QENNNNNNNNAPDAYDDVGKKKRLAF 313
                |::..|      .|....::.::....|::     :|.:..:.....:|.|         :
 Worm   222 ----SFLKWLFIKVGKFGAGPFIVVQKSVTDAVMSRIAQREADKKHGVEPGEAAD---------Y 273

  Fly   314 LDLLIDASKE------------------GTVLSNEDIREEVDTFMFEGHDTTSAAISWTLFLLGC 360
            :|:.::|..|                  ...|:.::|..:...|:..|.|||:.::|:..:.|..
 Worm   274 IDMFLNARAEVEHFGESNDEFHKSSSYNNRQLTTQEIISQCFVFLVAGFDTTAISLSYVTYFLAL 338

  Fly   361 HPEYQERVVEELDSIFGDDKETP---ATMKNLMDMRYLECCIKDSLRLFPSVPMM-ARMVGEDVN 421
            :|:.|.::.:|:      |||.|   .|...|..::|::..||:||||||..... :|....:..
 Worm   339 NPKIQSKLQDEV------DKECPNDEITFDQLSKLKYMDNVIKESLRLFPFASFANSRRCMRNTV 397

  Fly   422 IGGKIVPAGTQAIIMTYALHRNPRVFPKP-EQFNPDNF----LPENCAGRHPFAYIPFSAGPRNC 481
            ||.:||.||...:|.|:.||.:..|:... |:|.|:.:    .|:.       ||:.|.||||.|
 Worm   398 IGEQIVEAGVDVMIDTWTLHHDKNVWGNDVEEFKPERWDSPLTPQQ-------AYLSFGAGPRVC 455

  Fly   482 IGQKFAILEEKAVISTVLRKYKIEAVDRRE-DLTLLGELILRPKDGLRVKITPR 534
            :|.:||:||:|.::|.:|:||..|...:.: .:.|:|....|| :.|.:.:.||
 Worm   456 LGMRFALLEQKGLLSHILKKYTFETNAKTQLPIKLVGRATARP-ENLFLSLKPR 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4c3NP_524598.1 p450 59..531 CDD:278495 127/540 (24%)
cyp-13A8NP_496115.1 p450 27..503 CDD:278495 127/538 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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