DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4c3 and cyp-13A5

DIOPT Version :9

Sequence 1:NP_524598.1 Gene:Cyp4c3 / 43663 FlyBaseID:FBgn0015032 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_496112.1 Gene:cyp-13A5 / 188356 WormBaseID:WBGene00011672 Length:520 Species:Caenorhabditis elegans


Alignment Length:562 Identity:138/562 - (24%)
Similarity:243/562 - (43%) Gaps:103/562 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 ITVFLLGSILIFLVVYNKRRSRLVKYI--------EKIPGPAAMPFLGNAIEMNVDHDELFNRVI 85
            :::.:.|:..|.|:.|         ||        :.:.||...||.|...|.. |::.     .
 Worm     3 LSILIAGASFIGLLTY---------YIWIWSFWIRKGVKGPRGFPFFGVIHEFQ-DYEN-----P 52

  Fly    86 GMQKL--WGTRIG-INRVWQGTAPRVLLFEPETVEPILNSQKFVNKSHDYDY---LHPWLGE--- 141
            |:.||  |....| |..:.:|....:::..||.|..:     || |..|..|   .:|..|:   
 Worm    53 GLLKLGEWTKEYGPIYGITEGVEKTLIVSNPEFVHEV-----FV-KQFDNFYGRKTNPIQGDPNK 111

  Fly   142 ----GLLTSTDRKWHSRRKILTPAFHFKILDDFIDVFNEQSAVLARKL-AVEVGSEAFNLFPYVT 201
                .|:::...:|...|.:.:|.|..|.|...:....|....|.|.| ......:|.:|..|..
 Worm   112 NKRAHLVSAQGHRWKRLRTLSSPTFSNKNLRKIMSTVEETVVELMRHLDDASAKGKAVDLLDYYQ 176

  Fly   202 LCTLDIVCETAMGRRIYAQS----NSESEYVKAVYGIGSIVQSRQAKIWLQSDFIFSLTAEYKLH 262
            ..||||:...|||:   .:|    |.....||.::..|     |:....:...|..:.|...:..
 Worm   177 EFTLDIIGRIAMGQ---TESLMFRNPMLPKVKGIFKDG-----RKLPFLVSGIFPIAGTMFREFF 233

  Fly   263 QSYINTLHGFSNMVIRERKAELAILQENNNNNNNNAPDAYDDVGKKKRLAFLDLLIDA------- 320
            ..:.:....|..|...|:.....:.|...:......|.     |:.:  .|:||.:||       
 Worm   234 MRFPSIQPAFDIMSTVEKALNKRLEQRAADEKAGIEPS-----GEPQ--DFIDLFLDARANVDFF 291

  Fly   321 -------------SKEGTVLSNEDIREEVDTFMFEGHDTTSAAISWTLFLLGCHPEYQERVVEEL 372
                         :|....|:.::|..::..|:..|:|||:.::|::.:||..|||.|:::.||:
 Worm   292 EEESALGFAKTEIAKVDKQLTFDEIIGQLFVFLLAGYDTTALSLSYSSYLLARHPEIQKKLQEEV 356

  Fly   373 DSIFGDDKETP---ATMKNLMDMRYLECCIKDSLRLFPSVPMM-ARMVGEDVNIGGKIVPAGTQA 433
                  |:|.|   .|...:..::|:||.:|::||::|...:: .|...::.|:.|..:..||..
 Worm   357 ------DRECPNPEVTFDQISKLKYMECVVKEALRMYPLASIVHNRKCMKETNVLGVQIEKGTNV 415

  Fly   434 IIMTYALHRNPRVFPKPEQFNPDNFLPENC-AGRHPF----AYIPFSAGPRNCIGQKFAILEEKA 493
            .:.|:.||.:|:|:.:    :.:.|.||.. :|...|    .|:||..|||.|||.:.|::|:|.
 Worm   416 QVDTWTLHYDPKVWGE----DANEFRPERWESGDELFYAKGGYLPFGMGPRICIGMRLAMMEKKM 476

  Fly   494 VISTVLRKYKIEAVDRRE-DLTLLGELILRPKDGLRVKITPR 534
            :::.:|:||..|...:.| .|.|:|.....|: .:.:|:|||
 Worm   477 LLTHILKKYTFETSTQTEIPLKLVGSATTAPR-SVMLKLTPR 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4c3NP_524598.1 p450 59..531 CDD:278495 128/519 (25%)
cyp-13A5NP_496112.1 p450 33..514 CDD:278495 128/518 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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