DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4c3 and cyp-13A12

DIOPT Version :9

Sequence 1:NP_524598.1 Gene:Cyp4c3 / 43663 FlyBaseID:FBgn0015032 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_499705.1 Gene:cyp-13A12 / 184473 WormBaseID:WBGene00008810 Length:518 Species:Caenorhabditis elegans


Alignment Length:578 Identity:149/578 - (25%)
Similarity:253/578 - (43%) Gaps:123/578 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 SILLSKVGQVISGYSPITVFLLGSILIFLVVYNKRRSRLVKYIEKIPGPAAMPFLGNAIEMNVDH 77
            :||.|.:| |:|.|            ::...|.|||.        |.||:..|.||:|:||....
 Worm     7 AILTSIIG-VLSFY------------LWTWSYWKRRG--------IAGPSGYPILGSALEMLSSE 50

  Fly    78 DELFNRVIGMQKLWGTRIGINRVWQGTAPRVLLFEPETVEPILNSQKFVNKSHDYDY---LHPWL 139
            :..:.::....|.:|...||.   :|.:..:::.:|:.|:.:     || |.:|..:   |:|..
 Worm    51 NPPYLQLKEWTKQYGKVYGIT---EGLSRTLVISDPDLVQEV-----FV-KQYDNFFGRKLNPIQ 106

  Fly   140 GE-------GLLTSTDRKWHSRRKILTPAFHFKILDDFIDVFNEQSAVLARKLAVEV-GSEAFNL 196
            |:       .|.:|...:|...|.|.:|.|....|........|.:..|.|.:.... |.:..:|
 Worm   107 GDPNKDKRVNLFSSQGHRWKRLRTISSPTFSNNSLRKLKTTVEECAVELLRHIEQHTDGGQPIDL 171

  Fly   197 FPYVTLCTLDIVCETAMGRRIYAQSNSES------EYVKAVYG---------------IGSIVQS 240
            ..:....|||::...|||     |::|:.      .||:||:|               ||.|::.
 Worm   172 LDFYQEFTLDVIGRIAMG-----QTDSQMFKNPLLPYVRAVFGEPRKGLFLSGSLAPWIGPILRM 231

  Fly   241 RQAKIWLQSDFIFSLTAEYKLHQSYINTLHGFSNMVIRERKAELAILQENNNNNNNNAPDAYDDV 305
                      .:|||....|  ...::.:...||.|  |::.:|.:..|....:.....|     
 Worm   232 ----------VMFSLPNIVK--NPAVHVIRHTSNAV--EQRVKLRMADEKAGIDPGEPQD----- 277

  Fly   306 GKKKRLAFLDLLIDASKEGTVLSN-----------------EDIREEVDTFMFEGHDTTSAAISW 353
                   |:||.:||..:...|.|                 |:|..:...|:..|.|||:.::|:
 Worm   278 -------FIDLFLDAKSDDVELENNEDFTKAGVKVTRQLTTEEIVGQCFVFLIAGFDTTALSLSY 335

  Fly   354 TLFLLGCHPEYQERVVEELDSIFGDDKETPATMKNLMDMRYLECCIKDSLRLFPSVPMM-ARMVG 417
            :.|||..||:.|:::.||:|....|.:   .|...|..::|:||.||::||::|...:. :|...
 Worm   336 SSFLLATHPKVQKKLQEEIDRECADPE---VTFDQLSKLKYMECVIKETLRMYPLGALANSRCCM 397

  Fly   418 EDVNIGGKIVPAGTQAIIMTYALHRNPRVFPK-PEQFNPDNFLPENCAGRHPF---AYIPFSAGP 478
            ....||...:..||..:..|:.||.:..::.: .|:|.|:.:   .....|.:   .||||..||
 Worm   398 RATKIGNYEIDEGTNILCDTWTLHSDKSIWGEDAEEFKPERW---ESGDEHFYQKGGYIPFGLGP 459

  Fly   479 RNCIGQKFAILEEKAVISTVLRKYKIEAVDRRE-DLTLLGELILRPKDGLRVKITPRD 535
            |.|||.:.|.:|||.::|.:||||.:|..::.: .|.|:|....:| :.:.:.:||||
 Worm   460 RQCIGMRLAYMEEKLLLSHILRKYTLEVCNKTQIPLKLIGSRTTQP-ESVWLNLTPRD 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4c3NP_524598.1 p450 59..531 CDD:278495 133/526 (25%)
cyp-13A12NP_499705.1 p450 33..507 CDD:278495 133/520 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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