DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4c3 and cyp-25A2

DIOPT Version :9

Sequence 1:NP_524598.1 Gene:Cyp4c3 / 43663 FlyBaseID:FBgn0015032 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_497776.2 Gene:cyp-25A2 / 175495 WormBaseID:WBGene00007964 Length:502 Species:Caenorhabditis elegans


Alignment Length:565 Identity:148/565 - (26%)
Similarity:250/565 - (44%) Gaps:121/565 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 ITVFLLGSILIFLV-----VYNKRRSRLVKYIEKI--PGPAAMPFLGNAIEMNVDHDE------- 79
            :.:.:|.||||.||     :...||.:. |..|||  .||....|:|| ::..||..|       
 Worm     1 MALLILTSILILLVSFIIYILFARREQF-KLREKIGLTGPEPHWFMGN-LKQIVDRKEKLGYDDS 63

  Fly    80 --LFNRVIGMQKLWGTRIGINRVWQGTAPRVLLFEPETVEPILNSQKFV-NKSHDYDYLHP---- 137
              .||.   :.|.:|...||   :.|....::|...|.::.:     |: |.|:..|.:.|    
 Worm    64 NKWFNE---LHKQYGETFGI---YFGAQMNIVLSNEEDIKEV-----FIKNFSNFSDRIVPPIFD 117

  Fly   138 --WLGEGLLTST-DRKWHSRRKILTPAF------------HFKILDDFIDVFNEQSAVLARKLAV 187
              .|.:.||.:| ...|...|..:.|.|            |.|: |.|:|:..|:::        
 Worm   118 SNQLNQSLLQNTYATGWKHTRSAIAPIFSTGKMKAMQETIHSKV-DLFLDILREKAS-------- 173

  Fly   188 EVGSEAFNLFPYVTLCTLDIVCETAMGRRIYA-QSNSESE-----YVKAVYGIGSIVQSRQAKIW 246
              ..:.::::......|||::     |:..:| .||.:.:     ||.|...|.:| ..|.:|: 
 Worm   174 --SGQKWDIYEDFQGLTLDVI-----GKCAFAIDSNCQRDRNDVFYVNARKFIANI-DIRHSKV- 229

  Fly   247 LQSDFIFSLTAE-----YK---LHQSYINTLHGFSNMVIRERKAELAILQENNNNNNNNAPDAYD 303
            :.:.||....|.     ||   |..:.|..:.|.||:..|.|..|              ..|:.|
 Worm   230 IAASFILPELAPLWRALYKYTPLADAEIPLVEGLSNVYERRRGGE--------------GSDSVD 280

  Fly   304 DVGKKKRLAFLDLLI----DASKEGTVLSNEDIREEVDTFMFEGHDTTSAAISWTLFLLGCHPEY 364
                     .|.||:    |.||.   ::.:::.|....|:..|::|||.|:::..:||..:|..
 Worm   281 ---------LLKLLLNREDDKSKP---MTKQEVIENCFAFLLAGYETTSTAMTYCSYLLSKYPNV 333

  Fly   365 QERVVEELDSIFGDDKETPA-TMKNLMDMRYLECCIKDSLRLFPSV-PMMARMVGEDVNIGGKIV 427
            |:::.||:    .:.||... |..::.:|:||:...|::||.:|.| ..:.|....|:.|.|:..
 Worm   334 QQKLYEEI----MEAKENGGLTYDSIHNMKYLDYVYKETLRCYPPVIHFINRRCLADITIRGQFY 394

  Fly   428 PAGTQAIIMTYALHRNPRVFPKPEQFNPDNFLPENCAGR-HPFAYIPFSAGPRNCIGQKFAILEE 491
            |.|:....:.:.:|.||..:..||:|:|:.|  ||...: ....:|||..|||.|:|.:||.:|.
 Worm   395 PKGSVVTCLPHTVHLNPENWDSPEEFHPERF--ENWEEKSSSLKWIPFGVGPRYCVGMRFAEMEF 457

  Fly   492 KAVISTVLRKYKIEAVDRREDLTL-LGELILRPKDGLRVKITPRD 535
            |..|..:|..::::......||.. ...:|:||||.:|:.:.||:
 Worm   458 KTTIVKLLDTFELKQFKGEADLIPDCNGVIMRPKDPVRLLLKPRN 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4c3NP_524598.1 p450 59..531 CDD:278495 133/522 (25%)
cyp-25A2NP_497776.2 p450 38..498 CDD:278495 133/521 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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