DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4c3 and cyp-13A10

DIOPT Version :10

Sequence 1:NP_524598.1 Gene:Cyp4c3 / 43663 FlyBaseID:FBgn0015032 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_496085.3 Gene:cyp-13A10 / 174522 WormBaseID:WBGene00014254 Length:519 Species:Caenorhabditis elegans


Alignment Length:552 Identity:134/552 - (24%)
Similarity:240/552 - (43%) Gaps:106/552 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 ITVFLLGSILIFLVVYNKRRSRLVKYIEKIPGPAAMPFLGNAIEMNVDHDELFNRVIGMQKLWGT 93
            |....:|.|..:|.::...|.|      .||||...|.:|:..:........:.::....||:|.
 Worm     8 IPTLFIGFISYYLWIWTYWRRR------GIPGPLGYPLVGSFPKTLKSEYPQYLQIRDWTKLYGP 66

  Fly    94 RIGINRVWQGTAPRVLLFEPETVEPILNSQKFVNKSHDYDY---LHPWLGE-------GLLTSTD 148
            ..|..   :||...:::.:.:.|..|...|      :|..|   |:|..|:       .|.::..
 Worm    67 IYGYT---EGTIKTLIVSDIDIVRQIFVEQ------YDNFYGRKLNPIQGDPEKDERTNLFSAQG 122

  Fly   149 RKWHSRRKILTPAFHFKILDDFIDVFNEQSAVLARKLAVEVGSEA--FNLFPYVTLCTLDIVCET 211
            .:|...|.|.:|.|....|.. |:|..|.||:...:...|..||.  .::..:....|:|.:...
 Worm   123 FRWKRLRAISSPTFSNNSLRK-INVTVEDSAMELLRHIEEQTSEGQQIDMLQFYQEFTMDTIGRI 186

  Fly   212 AMGRRIYAQSNSES------EYVKAVYG--------IGSIVQSRQAKIWLQSDFIFSLTAEYKLH 262
            |||     |::|:.      ::|:|::|        ||.:..:      |...|.|.:..     
 Worm   187 AMG-----QTDSQMFKNPLLKFVRAIFGDNRKHIPLIGGVFPT------LAQVFRFFMLK----- 235

  Fly   263 QSYINTLHGFSNMVIRERKAELAI---LQENNNNNNNNAPDAYDDVGKKKRLAFLDLLIDA---- 320
                ..|.|.:|.:...:....|:   :.:..|:..|..     ::|:.:  .|:||.::|    
 Worm   236 ----FPLLGAANFIHVNKTVVTAVQNRIDQRENDRKNGI-----EIGEPQ--DFIDLFLEARADD 289

  Fly   321 -----------SKEGTV----LSNEDIREEVDTFMFEGHDTTSAAISWTLFLLGCHPEYQERVVE 370
                       ||..:.    |:.::|..:...|:..|.|||:.::|:|.|||..|||.|:::.|
 Worm   290 VEHFQENNGDFSKTSSYGNRQLTTQEIVGQCLVFLIAGFDTTALSLSYTTFLLATHPEVQKKLQE 354

  Fly   371 ELDSIFGDDKETPATMKNLMDMRYLECCIKDSLRLFPSVPMM-ARMVGEDVNIGGKIVPAGTQAI 434
            |::.   :..|...:..:|..::|::|.||::|||:|...|. :|.......:|...|..||...
 Worm   355 EIER---ECIEPSISFDHLSKLKYMDCIIKETLRLYPLGTMANSRRCMRATKLGNVEVEVGTMVQ 416

  Fly   435 IMTYALHRNPRVF-PKPEQFNPDNFLPENC-----AGRHPFAYIPFSAGPRNCIGQKFAILEEKA 493
            :.|::||.:.::: ...::|.|:.:|..||     .|    .||.|..|||.|:|.:.|.:|||.
 Worm   417 VDTWSLHTDTKIWGDDAKEFKPERWLDPNCDQVFQKG----GYISFGLGPRQCVGMRLAYMEEKM 477

  Fly   494 VISTVLRKYKIEAVDRRE-DLTLLGELILRPK 524
            :::.:||||..|...:.| .|.|:|....:|:
 Worm   478 LLAHILRKYTFEVGTKTEIPLKLVGRATTQPE 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4c3NP_524598.1 CYP4V-like 96..529 CDD:410753 119/485 (25%)
cyp-13A10NP_496085.3 CYP3A-like 64..509 CDD:410678 119/488 (24%)

Return to query results.
Submit another query.