DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4c3 and Cyp4b1

DIOPT Version :9

Sequence 1:NP_524598.1 Gene:Cyp4c3 / 43663 FlyBaseID:FBgn0015032 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_031849.1 Gene:Cyp4b1 / 13120 MGIID:103225 Length:511 Species:Mus musculus


Alignment Length:540 Identity:180/540 - (33%)
Similarity:285/540 - (52%) Gaps:52/540 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 MAESIL---LSKVGQVISGYSPITVFLLGSILIFLVVYNK------RRSRLVKYIEKIPGPAAMP 65
            ||.|.|   ||::|            |..|::|.:|...|      ||.:|.:.::..|||....
Mouse     1 MALSFLSPSLSRLG------------LWASVVILMVTVLKLLSLLFRRQKLARALDSFPGPPKHW 53

  Fly    66 FLGNAIEMNVDHDELFNRVIGMQKL--WGTRIG-INRVWQGTAPRVL-LFEPETVEPILNSQKFV 126
            ..|:|:|:        .:..|:.|:  |..:.. .:.:|.|.....| ::||:..:.:. |:...
Mouse    54 LFGHALEI--------QKTGGLDKVVTWTEQFPYAHPLWLGQFIVFLNIYEPDYAKAVY-SRGDP 109

  Fly   127 NKSHDYDYLHPWLGEGLLTSTDRKWHSRRKILTPAFHFKILDDFIDVFNEQSAVLARKLAVEVG- 190
            ..::.||:...|:|:|||.....||...||:|||.||:.:|..::.:|.|.:.|:..|...:.. 
Mouse   110 KAAYVYDFFLQWIGKGLLVLEGPKWFQHRKLLTPGFHYDVLKPYVAIFAESTRVMLDKWEKKASE 174

  Fly   191 SEAFNLFPYVTLCTLDIVCETAMGRRIYAQSNSESEYVKAVYGIGSIVQSRQAKIWLQSDFIFSL 255
            :::|::|..|....||.:.:...|:.....|:|::.|..||..:..::|.|.......:|||:.|
Mouse   175 NKSFDIFCDVGHMALDTLMKCTFGKGDSGLSHSDNSYYLAVSDLTLLMQQRIDSFQYHNDFIYWL 239

  Fly   256 TAEYKLHQSYINTLHGFSNMVIRERKAELAILQENNNNNNNNAPDAYDDVGKKKRLAFLDLLIDA 320
            |...:.........|..::.|||:|||.|...:|...            :.:::.|.|||:|:.|
Mouse   240 TPHGRRFLRACQIAHDHTDHVIRQRKAALQDEKEQKK------------LQERRHLDFLDILLGA 292

  Fly   321 SKE-GTVLSNEDIREEVDTFMFEGHDTTSAAISWTLFLLGCHPEYQERVVEELDSIFGDDKETPA 384
            ..| |..||:.|:|.|||||||||||||::.|||.|:.:..:|.:|:|..||:..|.||  ....
Mouse   293 RDESGIKLSDADLRAEVDTFMFEGHDTTTSGISWFLYCMALYPMHQQRCREEVREILGD--RDSF 355

  Fly   385 TMKNLMDMRYLECCIKDSLRLFPSVPMMARMVGEDVN-IGGKIVPAGTQAIIMTYALHRNPRVFP 448
            ...:|..|.||..|:|:..||:|.||.:.|.:.:.|. :.|:.:|||:...:..||||||..|:|
Mouse   356 QWDDLAQMTYLTMCMKECFRLYPPVPQVYRQLSKPVTFVDGRSLPAGSLISLHIYALHRNSAVWP 420

  Fly   449 KPEQFNPDNFLPENCAGRHPFAYIPFSAGPRNCIGQKFAILEEKAVISTVLRKYKIEAVDRREDL 513
            .||.|:|..|.|||..||||||::||||||||||||:||:.|.|.|.:..|.:::. :.|..:..
Mouse   421 DPEVFDPLRFSPENMTGRHPFAFMPFSAGPRNCIGQQFAMNEMKVVTALCLLRFEF-SPDPSKIP 484

  Fly   514 TLLGELILRPKDGLRVKITP 533
            ..:.:||||.|:|:.:.:.|
Mouse   485 IKVPQLILRSKNGIHLYLKP 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4c3NP_524598.1 p450 59..531 CDD:278495 164/478 (34%)
Cyp4b1NP_031849.1 p450 47..500 CDD:278495 164/476 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167845013
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9GY
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X23
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.650

Return to query results.
Submit another query.