DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4c3 and Cyp3a13

DIOPT Version :9

Sequence 1:NP_524598.1 Gene:Cyp4c3 / 43663 FlyBaseID:FBgn0015032 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_031845.1 Gene:Cyp3a13 / 13113 MGIID:88610 Length:503 Species:Mus musculus


Alignment Length:544 Identity:141/544 - (25%)
Similarity:261/544 - (47%) Gaps:79/544 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 VISGYSPITVFLLGSILIFLVVYNKRRSRLVKYIEKIPGPAAMPFLGNAI-------EMNVDHDE 79
            :|..:|..|..||.:.|:.|.:|......:.|.: .||||..:||||..:       |.::...:
Mouse     3 LIPNFSMETWMLLATSLVLLYLYGTHSHGIFKKL-GIPGPKPLPFLGTILAYQKGFWECDIQCHK 66

  Fly    80 LFNRVIGMQKLWGTRIGINRVWQGTAPRVLLFEPETVEPILNSQ---KFVNKSHDYDYLHP--WL 139
            .:.      |:||       ::.|..|.:.:.:|:.::.:|..:   .|.|:..    ..|  .|
Mouse    67 KYG------KMWG-------LYDGRQPVLAITDPDIIKTVLVKECYSTFTNRRR----FGPVGIL 114

  Fly   140 GEGLLTSTDRKWHSRRKILTPAFHFKILDDFIDVFNEQSAVLARKLAVEVG-------SEAFNLF 197
            .:.:..|.:.:|...|.:|:|.|....|.:...:.|:.:.||.|.:...:|       .:.|..:
Mouse   115 KKAISISENEEWKRIRALLSPTFTSGRLKEMFPIINQFTDVLVRNMRQGLGEGKPTSMKDIFGAY 179

  Fly   198 PYVTLCTLDIVCETAMGRRIYAQSNSESEYVKAVYGIGSIVQSRQAKIWLQSDF---IFSLTAEY 259
                  ::|::..|:.|..|.:.:|.:..:|:.:            |..|:.|.   :|.....:
Mouse   180 ------SMDVITATSFGVNIDSLNNPQDPFVEKI------------KKLLKFDIFDPLFLSVTLF 226

  Fly   260 KLHQSYINTLHG--FSNMVIRERKAELAILQENNNNNNNNAPDAYDDVGKKKRLAFLDLLIDASK 322
            .......:.|:.  |...||......:..::||.....           :|:|:.||.|:|::..
Mouse   227 PFLTPVFDALNVSLFPRDVISFFTTSVERMKENRMKEK-----------EKQRVDFLQLMINSQN 280

  Fly   323 EGT-----VLSNEDIREEVDTFMFEGHDTTSAAISWTLFLLGCHPEYQERVVEELDSIFGDDKET 382
            ..|     .||:.:|..:...|:|.|::|||:|:|:.|:||..||:.|:::.:|:|:..  ..:.
Mouse   281 YKTKESHKALSDVEIVAQSVIFIFAGYETTSSALSFALYLLAIHPDVQKKLQDEIDAAL--PNKA 343

  Fly   383 PATMKNLMDMRYLECCIKDSLRLFPSVPMMARMVGEDVNIGGKIVPAGTQAIIMTYALHRNPRVF 447
            |||...|:.|.||:..:.::|||:|....:.|:...||.|.|..:|.||..:|.|:|||::|:.:
Mouse   344 PATYDTLLQMEYLDMVVNETLRLYPIAGRLERVCKTDVEINGLFIPKGTVVMIPTFALHKDPKYW 408

  Fly   448 PKPEQFNPDNFLPENCAGRHPFAYIPFSAGPRNCIGQKFAILEEKAVISTVLRKYKIEAVDRRE- 511
            |:||:|.|:.|..:|....:|:.|:||.:|||||||.:||::..|..:..||:.:.::.....| 
Mouse   409 PEPEEFRPERFSKKNQDSINPYMYLPFGSGPRNCIGMRFALINMKVALVRVLQNFTVQPCKETEI 473

  Fly   512 DLTLLGELILRPKDGLRVKITPRD 535
            .|.|..:.:|:|::.|.:|:..||
Mouse   474 PLKLSKQGLLQPENPLLLKVVSRD 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4c3NP_524598.1 p450 59..531 CDD:278495 128/501 (26%)
Cyp3a13NP_031845.1 p450 39..491 CDD:365848 128/499 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.