DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4c3 and Cyp4v3

DIOPT Version :9

Sequence 1:NP_524598.1 Gene:Cyp4c3 / 43663 FlyBaseID:FBgn0015032 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_598730.1 Gene:Cyp4v3 / 102294 MGIID:2142763 Length:525 Species:Mus musculus


Alignment Length:528 Identity:249/528 - (47%)
Similarity:346/528 - (65%) Gaps:17/528 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LMAESILLSKVGQVISGYSPITVFLLGSILIFLVVYNKRRSRLVKYIEKIPGPA-AMPFLGNAIE 72
            |..:.:||......:| .:..|:.:  ||...||.|    :|..:.:..||..| |.|.:|:|:.
Mouse     8 LSGQKLLLWGAASAVS-LAGATILI--SIFPMLVSY----ARKWQQMRSIPSVARAYPLVGHALY 65

  Fly    73 MNVDHDELFNRVIGMQKLWGTRIGINRVWQGTAPRVLLFEPETVEPILNSQKFVNKSHDYDYLHP 137
            |..::.|.|.::|...:.: ..:.|.::|.|..|.|.|::.|.||.||.|.|.::||..|.:|.|
Mouse    66 MKPNNAEFFQQLIYYTEEF-RHLPIIKLWIGPVPLVALYKAENVEVILTSSKQIDKSFLYKFLQP 129

  Fly   138 WLGEGLLTSTDRKWHSRRKILTPAFHFKILDDFIDVFNEQSAVLARKLAVEVGSEAFNLFPYVTL 202
            |||.||||||..||.:|||:|||.|||.||::|:||.|||:.:|..||...|..||||.|.|:||
Mouse   130 WLGLGLLTSTGSKWRTRRKMLTPTFHFTILENFLDVMNEQANILVNKLEKHVNQEAFNCFFYITL 194

  Fly   203 CTLDIVCETAMGRRIYAQSNSESEYVKAVYGIGSIVQSRQAKIWLQSDFIFSLTAEYKLHQSYIN 267
            |.|||:||||||:.|.||||::||||:.||.:..::..|....||..|..:.:..|.:.|:..:.
Mouse   195 CALDIICETAMGKNIGAQSNNDSEYVRTVYRMSDMIYRRMKMPWLWFDLWYLVFKEGRDHKRGLK 259

  Fly   268 TLHGFSNMVIRERKAELAILQENNNNNNNNAPDAYDDVGKKKRLAFLDLLIDAS-KEGTVLSNED 331
            .||.|:|.||.||..|....::.........|      .|.||.||||||:..: :||..||.||
Mouse   260 CLHTFTNNVIAERVKERKAEEDWTGAGRGPIP------SKNKRKAFLDLLLSVTDEEGNRLSQED 318

  Fly   332 IREEVDTFMFEGHDTTSAAISWTLFLLGCHPEYQERVVEELDSIFGDDKETPATMKNLMDMRYLE 396
            ||||||||||||||||:|||:|:|:|||.:||.|.:|.:|||.:|| ....|.|:::|..::||:
Mouse   319 IREEVDTFMFEGHDTTAAAINWSLYLLGTNPEVQRKVDQELDEVFG-RSHRPVTLEDLKKLKYLD 382

  Fly   397 CCIKDSLRLFPSVPMMARMVGEDVNIGGKIVPAGTQAIIMTYALHRNPRVFPKPEQFNPDNFLPE 461
            |.||::||:|||||:.||.:.||..:||..|..||:|||:.|||||:||.||.||:|.|:.|.||
Mouse   383 CVIKETLRVFPSVPLFARSLSEDCEVGGYKVTKGTEAIIIPYALHRDPRYFPDPEEFRPERFFPE 447

  Fly   462 NCAGRHPFAYIPFSAGPRNCIGQKFAILEEKAVISTVLRKYKIEAVDRREDLTLLGELILRPKDG 526
            |..||||:||:|||||||||||||||::|||.:::.:||::.:|:..:||:|.|.|:|||||.:|
Mouse   448 NSQGRHPYAYVPFSAGPRNCIGQKFAVMEEKTILACILRQFWVESNQKREELGLAGDLILRPNNG 512

  Fly   527 LRVKITPR 534
            :.:|:..|
Mouse   513 IWIKLKRR 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4c3NP_524598.1 p450 59..531 CDD:278495 235/473 (50%)
Cyp4v3NP_598730.1 p450 51..517 CDD:278495 235/473 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167844920
Domainoid 1 1.000 460 1.000 Domainoid score I483
eggNOG 1 0.900 - - E33208_3B9GY
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H133054
Inparanoid 1 1.050 471 1.000 Inparanoid score I1498
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 1 1.000 - - oto93377
orthoMCL 1 0.900 - - OOG6_100014
Panther 1 1.100 - - O PTHR24291
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4308
SonicParanoid 1 1.000 - - X23
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1514.830

Return to query results.
Submit another query.