DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4c3 and LOC100487846

DIOPT Version :9

Sequence 1:NP_524598.1 Gene:Cyp4c3 / 43663 FlyBaseID:FBgn0015032 Length:535 Species:Drosophila melanogaster
Sequence 2:XP_017950484.2 Gene:LOC100487846 / 100487846 -ID:- Length:512 Species:Xenopus tropicalis


Alignment Length:535 Identity:126/535 - (23%)
Similarity:243/535 - (45%) Gaps:64/535 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 YSPITVFLLGSILIFLVVYNKRRSRLVKYIEKIPGPAAMPFLG-------NAIEMNVDHDELFNR 83
            :|..|..||..:|..|..|.....||.|.. .||||..:||:|       ..:|.::...:.:..
 Frog     7 FSKETWTLLVLLLTLLAYYAIWPYRLFKRY-GIPGPTPIPFIGTFLGNRHGLMEFDMKCFKKYGN 70

  Fly    84 VIGMQKLWGTRIGINRVWQGTAPRVLLFEPETVEPILNSQKFVNKSHDYDY-LHPWLGEGLLTST 147
            |      ||       .:.|..|.:.:.:|..::.|:..:.:.|.::..|: |...|...:|.|.
 Frog    71 V------WG-------FYDGPQPVLAILDPVIIKSIMVKECYTNFTNRRDFGLSGPLKSSVLMSK 122

  Fly   148 DRKWHSRRKILTPAFHFKILDDFIDVFNEQSAVLARKLAVEV-GSEAFNLFPYVTLCTLDIVCET 211
            |.:|...|.:|:|.|....|.....:......:|.:.:..:: ..|..::.......::|.:..|
 Frog   123 DEQWKRIRTVLSPTFTSGKLKQMFPLMKHYGELLVKNIHKKIDNKEPLDMKSIFGSYSMDTILST 187

  Fly   212 AMGRRIYAQSNSESEYVKAVYGIGSIVQSRQAKIWLQSDF--IFSLTAEYKLHQSYINTLH--GF 272
            :....:.:.:|....:|           :....::..|.|  :|.:|........:::.::  ..
 Frog   188 SFSVNVDSMNNPNDPFV-----------TNARNLFTFSFFKPLFLITILCPFLVPFLDKMNFCFL 241

  Fly   273 SNMVIRERKAELAILQENNNNNNNNAPDAYDDVGKKKRLAFLDLLIDA-SKEGTVLSNED---IR 333
            |:..::..|..:|.:::.....      |:.|     |:.||.|::|| |.||..:..|:   .:
 Frog   242 SSKFLKFFKDAVASIKKKRQKG------AHMD-----RVDFLQLMVDAQSNEGESVPEEEKHRHK 295

  Fly   334 EEVDT--------FMFEGHDTTSAAISWTLFLLGCHPEYQERVVEELDSIFGDDKETPATMKNLM 390
            |..||        |:..|::|||..:.:..:.:..:|:.|.::.||::::.  ..:.|.|...||
 Frog   296 ELSDTEILAQSLIFIMAGYETTSTTLMFLTYNIARYPDVQRKLEEEINTLL--PNKAPPTYDALM 358

  Fly   391 DMRYLECCIKDSLRLFPSVPMMARMVGEDVNIGGKIVPAGTQAIIMTYALHRNPRVFPKPEQFNP 455
            .|.|::..|.::|||.|....:.|:..:.:.|.|..:|||...::..:|||.||.::|:||:|.|
 Frog   359 KMEYMDMVINETLRLLPPAIRIDRVCKKTMEINGVTIPAGVVIVVPLFALHLNPEIWPEPEEFQP 423

  Fly   456 DNFLPENCAGRHPFAYIPFSAGPRNCIGQKFAILEEKAVISTVLRKYKIEAV-DRREDLTLLGEL 519
            :.|..||...:.|:.::||..|||||||.:||::..|..::.:|:.:|:|.. |....|.:....
 Frog   424 ERFSKENQKNQDPYNFLPFGVGPRNCIGMRFALVNIKLALTILLQNFKLETCKDTPVPLKVCTRG 488

  Fly   520 ILRPKDGLRVKITPR 534
            .|:|...:.:.:.|:
 Frog   489 NLKPTKPIILNLVPK 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4c3NP_524598.1 p450 59..531 CDD:278495 114/497 (23%)
LOC100487846XP_017950484.2 cytochrome_P450 67..498 CDD:425388 107/467 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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