DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sap-r and sftpba

DIOPT Version :9

Sequence 1:NP_524597.1 Gene:Sap-r / 43662 FlyBaseID:FBgn0000416 Length:953 Species:Drosophila melanogaster
Sequence 2:XP_001334098.4 Gene:sftpba / 794185 ZFINID:ZDB-GENE-091204-378 Length:221 Species:Danio rerio


Alignment Length:237 Identity:53/237 - (22%)
Similarity:86/237 - (36%) Gaps:57/237 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   650 LPPQLAFDPGFTAAPNCLICEELVKTLEKRMGKHPTRDSIKHILEESCDRMRKPMNTKCHKVIDK 714
            :||.     ...::..|.:|..:|.||.....|..|::.|..:||..|......:..:|:|::.|
Zfish     7 MPPM-----QMESSVQCSVCTYIVSTLGFLFPKERTQNIITVLLESLCKEFPPLVQPQCNKLVGK 66

  Fly   715 YGDKIADLLLKEMDPKLICTELGMCILADLDDLEVDEALKYDVIALPRQDNKLSSSIKEPPTCVL 779
            |...:.|:||....|..|||.|.:|        |:.|          ||.|.|:.|     .|..
Zfish    67 YVQMLVDMLLNNTSPNFICTLLRLC--------EISE----------RQINTLALS-----NCDS 108

  Fly   780 CEFIMTKLDADLKNKTEQDDIKRAIEAVCNRLPATVRKQCDTFVDGYASAVLKLLSDVPPKQ--- 841
            |..:.......|.:...:......:::||...|..:.| |:|:::.....:...||    ||   
Zfish   109 CLTLAVLTQMHLGSNATEHQAASFLDSVCQLNPNAMPK-CETYIERNGKQLSLFLS----KQQGA 168

  Fly   842 --VCQKLQLC-------------------FSVAVTDEVLECG 862
              .|:...||                   :|.......:|||
Zfish   169 LDTCKSANLCPSDDKESVITADPCSLGPKYSCRDLQTAVECG 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sap-rNP_524597.1 SapA 27..59 CDD:295328
SapB 70..146 CDD:214797
SapB_1 72..106 CDD:282970
SapB_2 115..146 CDD:281486
SapB 186..259 CDD:214797
SapB_2 228..259 CDD:281486
SapB 285..359 CDD:214797
SapB_1 287..320 CDD:282970
SapB_2 328..359 CDD:281486
SapB 436..510 CDD:214797
SapB_1 437..471 CDD:282970
SapB_2 479..510 CDD:281486
SapB 535..610 CDD:214797
SapB_1 537..571 CDD:282970
SapB_2 579..610 CDD:281486
SapB 666..739 CDD:214797 23/72 (32%)
SapB_1 666..700 CDD:282970 11/33 (33%)
SapB_2 708..739 CDD:281486 12/30 (40%)
SapB 775..849 CDD:214797 14/78 (18%)
SapB_1 777..811 CDD:282970 5/33 (15%)
SapB_2 819..849 CDD:281486 7/34 (21%)
SapB 859..938 CDD:214797 3/4 (75%)
sftpbaXP_001334098.4 SapB 18..91 CDD:214797 23/72 (32%)
SapB_2 60..91 CDD:281486 12/30 (40%)
SapB 106..178 CDD:214797 14/76 (18%)
SapA 189..219 CDD:280378 4/22 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580264
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54430
OrthoDB 1 1.010 - - D277021at33208
OrthoFinder 1 1.000 - - FOG0004597
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR11480
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.860

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