DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sap-r and Psapl1

DIOPT Version :9

Sequence 1:NP_524597.1 Gene:Sap-r / 43662 FlyBaseID:FBgn0000416 Length:953 Species:Drosophila melanogaster
Sequence 2:NP_001138322.1 Gene:Psapl1 / 289720 RGDID:1307368 Length:527 Species:Rattus norvegicus


Alignment Length:632 Identity:136/632 - (21%)
Similarity:216/632 - (34%) Gaps:181/632 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LLAVLALCCAFGVFAAATPLLGSSKCTWGPSYWCGNFSNSKECRATRHCIQTVWETQKVPVDTDS 70
            :|.||.|.........|:|:....:|..|...||.:...:..|||.|||...||..   |.....
  Rat     4 MLCVLILWSGLLGATKASPISVPHECAKGSEVWCQDLQAAARCRAVRHCQSAVWSK---PTVKSL 65

  Fly    71 ICTICKDMVTQARDQLKSNQTEEELKEVFEGSCKLIPIKPIQKECIKVADDFLPELV-------- 127
            .|::|:|:...|.:.:..:..|.::......:|:.:|.:....:|..:.|:....::        
  Rat    66 PCSVCQDVAAAASNGVNPDAKESDILASVMKTCEWLPSQESSAKCKWMVDNHSAAVLVMLRGAPG 130

  Fly   128 EALASQMNPDQVCSVAGLCNSARIDELYKNGIQAGLDGTVQNEDDSSEETELAMQPNQLSCGNCN 192
            .||||      ||:...||                                   :|.|       
  Rat   131 TALAS------VCTALTLC-----------------------------------EPLQ------- 147

  Fly   193 LLSRLMHSKFAATDR----DDMVETMLHMCGSLSSFSDACANIVLTYFNDIYDHVSKHLTTDAVC 253
                 .|...|.::|    :|..|.|          :...:|..||:      |.|: :...|||
  Rat   148 -----RHLAVATSERPLTQEDANEVM----------APFLSNGALTF------HPSQ-MPVGAVC 190

  Fly   254 HVSGVCASRYHQHEEEKQPQEALVALDAGDDIPCELCEQLVKHLRDVLVANTTETEFKQVMEGFC 318
            |.                                  |.||:..|:..|.:|.|..|.  .::..|
  Rat   191 HD----------------------------------CVQLISRLQSALESNLTLAEV--TVQNQC 219

  Fly   319 KQSKGFKDECLSIVDQYYH---VIYETLVSKLDANGACCMIGIC--QKNSASSMKDVPIMPLLPV 378
             ||.|  ....::.:.|.|   |..:..:..|.....|...|.|  |:.||..:..|..:..:|.
  Rat   220 -QSMG--PGLAALCENYVHWQFVPAKQALQTLPPQEVCRKGGFCEEQRESAHWLAQVAAVDGVPS 281

  Fly   379 IEPAQVKITIEKLEKHEKKQLGASEPKFSQQEILDMQLPIDHLMGAANPGALVEGGELCTLCEYM 443
            :|       :|..:|:|                |.|||                 |..|.:|..:
  Rat   282 LE-------MELPKKNE----------------LQMQL-----------------GLTCDVCLNV 306

  Fly   444 LHFIQETLATPSTDDEIKHTVENICAKLPSGVAGQCRNFVEMYGDAVIALLVQGLNPRDVCPLMQ 508
            :..:.:.|.|.||:..|.|.:|.:|:.:|..:..||...|:.||..::. ||..:.|..||..::
  Rat   307 VQELDKWLETNSTEALISHALERVCSIMPESLVQQCITLVDTYGPNLVQ-LVSKVTPEKVCETIR 370

  Fly   509 MCPKNLPKKEDVEVFNPQP---ASDEQDPPTCPLC--LFAVEQAQMKIRDNKS-KDNIKKVLNGL 567
            :|......:....|....|   ..:|.....|..|  |..|....:   |.|| |.:|.....|.
  Rat   371 LCGSKRQARSISRVATTTPPLLMDEENQGSFCQGCKRLLGVSSQNL---DRKSTKRDILNAFKGG 432

  Fly   568 CSHLPNEIKEECVDFVNTYSNELIDMLITDFKPQEICVQLKLC--PK 612
            |..||.....:|..||..|...||:.|.....|.::|.::..|  ||
  Rat   433 CRILPLPYVLQCNRFVAEYEPVLIESLRFMMNPTDLCKKMGACHGPK 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sap-rNP_524597.1 SapA 27..59 CDD:295328 10/31 (32%)
SapB 70..146 CDD:214797 15/83 (18%)
SapB_1 72..106 CDD:282970 6/33 (18%)
SapB_2 115..146 CDD:281486 8/38 (21%)
SapB 186..259 CDD:214797 15/76 (20%)
SapB_2 228..259 CDD:281486 9/30 (30%)
SapB 285..359 CDD:214797 18/76 (24%)
SapB_1 287..320 CDD:282970 9/32 (28%)
SapB_2 328..359 CDD:281486 6/33 (18%)
SapB 436..510 CDD:214797 21/73 (29%)
SapB_1 437..471 CDD:282970 10/33 (30%)
SapB_2 479..510 CDD:281486 9/30 (30%)
SapB 535..610 CDD:214797 22/77 (29%)
SapB_1 537..571 CDD:282970 11/36 (31%)
SapB_2 579..610 CDD:281486 9/30 (30%)
SapB 666..739 CDD:214797
SapB_1 666..700 CDD:282970
SapB_2 708..739 CDD:281486
SapB 775..849 CDD:214797
SapB_1 777..811 CDD:282970
SapB_2 819..849 CDD:281486
SapB 859..938 CDD:214797
Psapl1NP_001138322.1 SapA 26..58 CDD:295328 11/31 (35%)
SapB 65..143 CDD:214797 15/83 (18%)
SapB 189..260 CDD:214797 21/109 (19%)
SapB 298..372 CDD:214797 21/74 (28%)
SapB_1 300..334 CDD:282970 10/33 (30%)
SapB_2 342..372 CDD:281486 9/30 (30%)
SapB 400..475 CDD:214797 22/77 (29%)
SapB_2 444..475 CDD:281486 9/30 (30%)
SapA 485..515 CDD:280378
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166344987
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 141 1.000 Inparanoid score I4402
OMA 1 1.010 - - QHG54430
OrthoDB 1 1.010 - - D277021at33208
OrthoFinder 1 1.000 - - FOG0004597
OrthoInspector 1 1.000 - - otm45749
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11480
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3212
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
109.910

Return to query results.
Submit another query.