DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sap-r and Psap

DIOPT Version :10

Sequence 1:NP_524597.1 Gene:Sap-r / 43662 FlyBaseID:FBgn0000416 Length:953 Species:Drosophila melanogaster
Sequence 2:XP_063135050.1 Gene:Psap / 25524 RGDID:3423 Length:564 Species:Rattus norvegicus


Alignment Length:646 Identity:143/646 - (22%)
Similarity:250/646 - (38%) Gaps:169/646 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LALCCAFGVFAAATPLLGSSKCTWGPSYWCGNFSNSKECRATRHCIQTVWETQKVPVDTDSICTI 74
            |||..:..|.|..:|:.....|:.|.:..|.:...:.:|||.:||.|.||..   |......|.|
  Rat     4 LALLASLLVTALTSPVQDPKICSGGSAVVCRDVKTAVDCRAVKHCQQMVWSK---PTAKSLPCDI 65

  Fly    75 CKDMVTQARDQLKSNQTEEELKEVFEGSCKLIPIKPIQKECIKVADDFLPELVEALASQM-NPDQ 138
            ||.:||:|.:.||.|.||||:....|.:|..|....:...|.:|.|.:||.:::.:..:| ||.:
  Rat    66 CKTVVTEAGNLLKDNATEEEILHYLEKTCAWIHDSSLSASCKEVVDSYLPVILDMIKGEMSNPGE 130

  Fly   139 VCSVAGLCNSARIDELYKNGIQAGLDGTVQNEDDSSEETELAMQPNQLSCGNCNLLSRLMHSKFA 203
            |||...||.|.:                           |...:.||         .:|..:|..
  Rat   131 VCSALNLCQSLQ---------------------------EYLAEQNQ---------RQLESNKIP 159

  Fly   204 ATDRDDMVETMLHMCGSLSSFSDACANIVLTYFNDIYDHVSKHLTTDAVCHVSGVCASRYHQHEE 268
            ..|                     .|.:|..:                   :|.:....|.|...
  Rat   160 EVD---------------------LARVVAPF-------------------MSNIPLLLYPQDRP 184

  Fly   269 EKQPQEALVALDAGDDIPCELCEQLVKHLRDVLVANTTETEFKQ-----VMEGFCKQSKGFKDEC 328
            ..|||.     .|.:|:    |:..:|.:.|:..|..|.:.|.|     |.|...:...|..|.|
  Rat   185 RSQPQP-----KANEDV----CQDCMKLVTDIQTAVRTNSSFVQGLVDHVKEDCDRLGPGVSDIC 240

  Fly   329 LSIVDQYYHVIYETLVSKLDANGACCMIGICQKNSASSMKDVPIMPLLPVIEPAQVKITIEKLEK 393
            .:.||||..|..: ::..:.....|.|:|.|.:     :|.||:..|:|..|  .:|..:..|| 
  Rat   241 KNYVDQYSEVAVQ-MMMHMQPKEICVMVGFCDE-----VKRVPMRTLVPATE--AIKNILPALE- 296

  Fly   394 HEKKQLGASEPKFSQQEILDMQLPIDHLMGAANPGALVEGGELCTLCEYMLHFIQETLATPSTDD 458
                   .::|  .:|:::..|..|                 .|.:|:.::..:.|.:...:|::
  Rat   297 -------LTDP--YEQDVIQAQNVI-----------------FCQVCQLVMRKLSELIINNATEE 335

  Fly   459 EIKHTVENICAKLPSGVAGQCRNFVEMYGDAVIALLVQGLNPRDVCPLMQMCPKN---------- 513
            .:...:...|:.||:..:.:|:..:..:|.:::.:|:..:||..:|.::.:|..|          
  Rat   336 LLIKGLSKACSLLPAPASTKCQEVLVTFGPSLLDVLMHEVNPNFLCGVISLCSANPNLVGTLEQP 400

  Fly   514 -------LPKKEDVEVFNPQPASDEQDPPT---------------CPLCLFAVEQAQMKIRDNKS 556
                   |||:       |.|....::|..               |.:|...|...:..:..|.:
  Rat   401 AAAIVSALPKE-------PAPPKQPEEPKQSALRAHVPPQKNGGFCEVCKKLVIYLEHNLEKNST 458

  Fly   557 KDNIKKVLNGLCSHLPNEIKEECVDFVNTYSNELIDMLITDFKPQEICVQLKLCPKTTYAL 617
            |:.|...|...||.||:..:::|.:||..|...|:::|:....|..:|.::.:|| :.|.|
  Rat   459 KEEILAALEKGCSFLPDPYQKQCDEFVAEYEPLLLEILVEVMDPSFVCSKIGVCP-SAYKL 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sap-rNP_524597.1 SapA 28..60 CDD:460487 10/31 (32%)
SapB 70..146 CDD:214797 28/76 (37%)
SapB 186..259 CDD:214797 6/72 (8%)
SapB 285..359 CDD:214797 20/78 (26%)
SapB 436..510 CDD:214797 13/73 (18%)
SapB 535..610 CDD:214797 19/89 (21%)
SapB 666..739 CDD:214797
SapB 775..849 CDD:214797
SapB 859..938 CDD:214797
PsapXP_063135050.1 None
Blue background indicates that the domain is not in the aligned region.

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