DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sap-r and Sftpb

DIOPT Version :9

Sequence 1:NP_524597.1 Gene:Sap-r / 43662 FlyBaseID:FBgn0000416 Length:953 Species:Drosophila melanogaster
Sequence 2:NP_680088.1 Gene:Sftpb / 20388 MGIID:109516 Length:377 Species:Mus musculus


Alignment Length:406 Identity:85/406 - (20%)
Similarity:156/406 - (38%) Gaps:82/406 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LLAVLALCCAFGVFAAATPLLGSSKCTWGPSYWCGNFSNSKECRATRHCIQTVWETQKVPVDTDS 70
            ||.:..|||......:|:.|    :|..||.:||.:..::.:|||..||:|.||.    ....:.
Mouse    10 LLLLPTLCCPGAAITSASSL----ECAQGPQFWCQSLEHAVQCRALGHCLQEVWG----HAGAND 66

  Fly    71 ICTICKDMVTQARDQLKSNQTEEELKEVFEGSCKLIPIKPIQKECIKVADDFLPELVEALASQMN 135
            :|..|:|:|.......|.:..:|.:::..|..|.::|:|.:...|.:|.|.:||.:::...||:|
Mouse    67 LCQECEDIVHLLTKMTKEDAFQEAIRKFLEQECDILPLKLLVPRCRQVLDVYLPLVIDYFQSQIN 131

  Fly   136 PDQVCSVAGLC--NSARIDELYKNGIQAGLDGTVQN-----------------------EDDSSE 175
            |..:|:..|||  ..|:.::      ..|:...|.|                       :|.|.:
Mouse   132 PKAICNHVGLCPRGQAKPEQ------NPGMPDAVPNPLLDKLVLPVLPGALLARPGPHTQDFSEQ 190

  Fly   176 ETELAMQPNQLSCGNCNLLSRLMHSKFAATDRDDMVETMLHMC-------GSLSSFSDACANIVL 233
            :..:.:.    .|..|..|.:.:.   |...:..:...:..:|       |.:      |..:..
Mouse   191 QLPIPLP----FCWLCRTLIKRVQ---AVIPKGVLAVAVSQVCHVVPLVVGGI------CQCLAE 242

  Fly   234 TYFNDIYDHVSKHLTTDAVCHVSGVCASRYHQHEEEKQPQ----EALVALDAGDDIPCELCEQLV 294
            .|...:.|.:...:....||.:...|::     |:...|.    |.|:......|..|..|:.::
Mouse   243 RYTVLLLDALLGRVVPQLVCGLVLRCST-----EDAMGPALPAVEPLIEEWPLQDTECHFCKSVI 302

  Fly   295 KHLRDVLVANTTETEFKQVMEGFCKQSKGFKDECLSIVDQYYHVIYETLVSKLDANGACCMIGIC 359
            ..     ..||:|....|.|...|.:....:.:|...|:|:...:...:....||:..|..:|:|
Mouse   303 NQ-----AWNTSEQAMPQAMHQACLRFWLDRQKCEQFVEQHMPQLLALVPRSQDAHITCQALGVC 362

  Fly   360 QKNSASSMKDVPIMPL 375
                     :.|..||
Mouse   363 ---------EAPASPL 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sap-rNP_524597.1 SapA 27..59 CDD:295328 11/31 (35%)
SapB 70..146 CDD:214797 21/75 (28%)
SapB_1 72..106 CDD:282970 8/33 (24%)
SapB_2 115..146 CDD:281486 11/30 (37%)
SapB 186..259 CDD:214797 11/79 (14%)
SapB_2 228..259 CDD:281486 5/30 (17%)
SapB 285..359 CDD:214797 15/73 (21%)
SapB_1 287..320 CDD:282970 8/32 (25%)
SapB_2 328..359 CDD:281486 7/30 (23%)
SapB 436..510 CDD:214797
SapB_1 437..471 CDD:282970
SapB_2 479..510 CDD:281486
SapB 535..610 CDD:214797
SapB_1 537..571 CDD:282970
SapB_2 579..610 CDD:281486
SapB 666..739 CDD:214797
SapB_1 666..700 CDD:282970
SapB_2 708..739 CDD:281486
SapB 775..849 CDD:214797
SapB_1 777..811 CDD:282970
SapB_2 819..849 CDD:281486
SapB 859..938 CDD:214797
SftpbNP_680088.1 SapA 27..60 CDD:295328 13/36 (36%)
SapB 66..142 CDD:214797 21/75 (28%)
SapB_1 68..102 CDD:282970 8/33 (24%)
SapB_2 111..142 CDD:281486 11/30 (37%)
SapB 197..268 CDD:214797 11/83 (13%)
SapB 294..362 CDD:214797 15/72 (21%)
SapB_2 331..362 CDD:281486 7/30 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167841624
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D277021at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11480
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.950

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