DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12071 and znf973

DIOPT Version :10

Sequence 1:NP_651832.3 Gene:CG12071 / 43660 FlyBaseID:FBgn0039808 Length:581 Species:Drosophila melanogaster
Sequence 2:NP_001104625.1 Gene:znf973 / 557295 ZFINID:ZDB-GENE-080218-9 Length:345 Species:Danio rerio


Alignment Length:223 Identity:58/223 - (26%)
Similarity:83/223 - (37%) Gaps:57/223 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 TYNIPKPNLIPFTEPYVE-GGSMHPASRLKALQQVQQASSGVRKTNPSKSTNKAFECTVCGKGLA 195
            |:.:.:.:|...|:...| .||......:|..::....:.|:.|.....|    |.||.|||.||
Zfish    16 TFTVKQEDLQEQTDLIEEKEGSKEEEHHVKIEEKTHLQTDGILKRRDKNS----FTCTQCGKILA 76

  Fly   196 RKDKLTIHMRIHTGEKPYICEVCNKAFARRDKLVIHM---------------NKFKHVTPTNIAP 245
            .|.||.|||.|||||||:.|..|.|:|:....|.:||               ..|.|     ::|
Zfish    77 SKSKLKIHMSIHTGEKPFTCTQCGKSFSLSSSLNLHMRIHTGEKPYTCTQCGKSFSH-----LSP 136

  Fly   246 LGKRLNNMVKKKEQPDPPPEDNKQ---SLELQLQQQAVQVAAQNIIVQSAQGAPTSIPGIIIPHH 307
            |.|.:.  :...|:|....:..|.   |..|.|..:.                           |
Zfish   137 LNKHMR--IHTGEKPFTCTQCGKSFSLSTSLNLHMRI---------------------------H 172

  Fly   308 QQQLSWTCELCGRMFSSRDEWSIHAKSH 335
            ..:..:||..||:.|:.....|.|...|
Zfish   173 TGEKPFTCTRCGKSFNCSSNLSKHMMIH 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12071NP_651832.3 zf-C2H2 185..207 CDD:395048 14/21 (67%)
C2H2 Zn finger 187..207 CDD:275368 13/19 (68%)
zf-H2C2_2 200..224 CDD:463886 15/23 (65%)
C2H2 Zn finger 215..232 CDD:275368 5/16 (31%)
znf973NP_001104625.1 C2H2 Zn finger 68..88 CDD:275368 13/19 (68%)
C2H2 Zn finger 96..116 CDD:275368 7/19 (37%)
COG5048 120..>337 CDD:227381 20/115 (17%)
C2H2 Zn finger 124..144 CDD:275368 5/26 (19%)
C2H2 Zn finger 152..172 CDD:275368 4/46 (9%)
C2H2 Zn finger 180..200 CDD:275368 6/19 (32%)
C2H2 Zn finger 208..228 CDD:275368
C2H2 Zn finger 236..256 CDD:275368
C2H2 Zn finger 264..284 CDD:275368
zf-H2C2_2 276..301 CDD:463886
C2H2 Zn finger 292..312 CDD:275368
zf-H2C2_2 304..329 CDD:463886
C2H2 Zn finger 320..340 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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