DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12071 and znf84

DIOPT Version :9

Sequence 1:NP_651832.3 Gene:CG12071 / 43660 FlyBaseID:FBgn0039808 Length:581 Species:Drosophila melanogaster
Sequence 2:NP_001016873.1 Gene:znf84 / 549627 XenbaseID:XB-GENE-5721064 Length:385 Species:Xenopus tropicalis


Alignment Length:382 Identity:82/382 - (21%)
Similarity:141/382 - (36%) Gaps:56/382 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   174 KTNPSKSTNKAFECTVCGKGLARKDKLTIHMRIHTGEKPYICEVCNKAFARRDKLVIHMNKFKHV 238
            :|:...|..|.:.||.|||.|:....|..|.||||||||:.|..|.|:|:.:..||.|.......
 Frog    10 QTSQLPSVAKRYGCTECGKTLSSLSNLYTHQRIHTGEKPHTCTECGKSFSVKYHLVKHFKTHTGA 74

  Fly   239 TPTNIAPLGK--------RLNNMVKKKEQPDPPPEDNKQ-SLELQLQQQAVQVAAQNIIVQSAQG 294
            .|......||        :.::.|...|:|....|..|: |.:..||........:.....:..|
 Frog    75 KPFMCMECGKTFSEKDQLQAHSRVHTGEKPFSCVECGKRFSSKGGLQYHHTTHTGEKPFTCTECG 139

  Fly   295 APTSIPGI--IIPH---HQQQLSWTCELCGRMFSSRDEWSIHAKSHLEYXQPERLVAESTKPAAA 354
              ...|.:  :..|   |..:..:.|.:||:.|.||.::..|::.|           ...||.|.
 Frog   140 --KCFPNVSGLNSHRLIHAGEKPFPCTVCGKSFISRSDYIGHSRIH-----------TGEKPFAC 191

  Fly   355 AAGVIAKTTSSNNSRNYQMDANQNQIQMEAQARKQ---------KIIIQNQMILNASHQQQQQPQ 410
            ..........:|.:|:|.:...:..:::.:.:.|.         ::...|:|......::|..|.
 Frog   192 TECGKRFCLKTNLTRHYVIHTREKPLKLGSSSSKNYSLPAPPLGEMFDMNRMWETIFSKEQPYPA 256

  Fly   411 QHPQ---------QQQHQQQQQQHVAHGKKAARKHQQHLQQQQQQQQQQQQQQQQQQQQT---SA 463
            .|..         ||...:.|....:.|:..  :|:|::.....|:...|......:.:|   ..
 Frog   257 SHDSHRGETFVMGQQFLYKLQPSCPSPGRDV--RHEQNVGNVLVQRATYQASNDSHRGETFVMGQ 319

  Fly   464 P-MYNNNSSSNHNGNNQSQEVSVPVSHIIANSPTAATYMQAQLSEHASNMQHGMPIV 519
            | :|....|....|.:...|.:  |.:::..   .|||..:..|........|.|.:
 Frog   320 PFLYKLQPSCPSPGRDVRHEQN--VENVLVE---RATYQASNDSHRGETFVMGQPFL 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12071NP_651832.3 zf-C2H2 185..207 CDD:278523 9/21 (43%)
C2H2 Zn finger 187..207 CDD:275368 9/19 (47%)
zf-H2C2_2 200..224 CDD:290200 14/23 (61%)
C2H2 Zn finger 215..232 CDD:275368 6/16 (38%)
znf84NP_001016873.1 C2H2 Zn finger 23..43 CDD:275368 9/19 (47%)
COG5048 <31..208 CDD:227381 45/189 (24%)
zf-H2C2_2 35..59 CDD:290200 13/23 (57%)
C2H2 Zn finger 51..71 CDD:275368 7/19 (37%)
zf-H2C2_2 63..87 CDD:290200 6/23 (26%)
C2H2 Zn finger 79..99 CDD:275368 2/19 (11%)
zf-H2C2_2 92..116 CDD:290200 5/23 (22%)
C2H2 Zn finger 107..127 CDD:275368 5/19 (26%)
zf-H2C2_2 120..142 CDD:290200 3/23 (13%)
C2H2 Zn finger 135..155 CDD:275368 3/21 (14%)
zf-H2C2_2 148..170 CDD:290200 5/21 (24%)
C2H2 Zn finger 163..183 CDD:275368 7/19 (37%)
zf-H2C2_2 179..198 CDD:290200 5/29 (17%)
C2H2 Zn finger 191..211 CDD:275368 3/19 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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