DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12071 and CG17328

DIOPT Version :10

Sequence 1:NP_651832.3 Gene:CG12071 / 43660 FlyBaseID:FBgn0039808 Length:581 Species:Drosophila melanogaster
Sequence 2:NP_609786.2 Gene:CG17328 / 34962 FlyBaseID:FBgn0028895 Length:413 Species:Drosophila melanogaster


Alignment Length:337 Identity:64/337 - (18%)
Similarity:106/337 - (31%) Gaps:138/337 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   160 KALQQVQQASSGVRKTNPSKSTNKAFECTVCGKGLARKDKLTIHMRIHTGEKPYICEVCNKAFAR 224
            |:.:.:.|.:..:|    :.:..|.::|:.|.:..|:|..|.:|.|.|||:||:.||:|:|.|:.
  Fly   154 KSFKCIAQLTQHIR----THTGEKPYQCSFCIQRFAQKYNLKVHERTHTGDKPFQCEICSKQFSA 214

  Fly   225 RDKLVIHMNKFKHVTPTNIAPLGKRLNNMVKKKEQPDPPPEDNKQSLELQLQQQAVQVA------ 283
            ......|                                     |.:.|.::.|...:.      
  Fly   215 LGNFQAH-------------------------------------QKIHLGVRDQVCSLCQKGFYT 242

  Fly   284 ----AQNIIVQSAQGAPTSIPGIIIPHHQQQLSWTCELCGRMFSSRDEWSIH-AKSH-LEYXQPE 342
                ::::|..:.          |..||       |::||:.||.|.:...| .|.| ||. ...
  Fly   243 AGDLSKHMITHTG----------IKNHH-------CDVCGKAFSRRRDMRTHKLKLHPLESSTNH 290

  Fly   343 RLV------AESTKP---------------------AAAAAGVIAKTTSSNN------------- 367
            .:|      |..|.|                     .|.:..:..:|.::||             
  Fly   291 DIVDDDDDEAIDTDPVGLDTLDHAHFKCPDCDKAFDTADSLSLHFRTHAANNNLLNLPLPPAPPM 355

  Fly   368 SRNYQMDANQN--------QIQMEAQARKQKIIIQNQMILNASHQQQQQPQQHPQQQQHQQQQQQ 424
            |.:|..||..:        |:.|.|.|                |.....|...|...:.:.....
  Fly   356 SHHYHHDALHHLGPPNPATQMGMAAMA----------------HMLAPPPPPPPTPSEGRYTMLH 404

  Fly   425 HVAHGKKAARKH 436
            |.|    |.|.|
  Fly   405 HTA----AQRLH 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12071NP_651832.3 zf-C2H2 185..207 CDD:395048 7/21 (33%)
C2H2 Zn finger 187..207 CDD:275368 7/19 (37%)
zf-H2C2_2 200..224 CDD:463886 13/23 (57%)
C2H2 Zn finger 215..232 CDD:275368 5/16 (31%)
CG17328NP_609786.2 zf-AD 8..80 CDD:214871
COG5048 146..>211 CDD:227381 19/60 (32%)
C2H2 Zn finger 149..169 CDD:275368 3/18 (17%)
C2H2 Zn finger 177..197 CDD:275368 7/19 (37%)
zf-H2C2_2 189..213 CDD:463886 12/23 (52%)
C2H2 Zn finger 205..225 CDD:275368 7/56 (13%)
C2H2 Zn finger 233..253 CDD:275368 1/19 (5%)
zf-H2C2_2 245..270 CDD:463886 8/41 (20%)
C2H2 Zn finger 261..282 CDD:275368 8/20 (40%)
C2H2 Zn finger 318..338 CDD:275368 1/19 (5%)
Blue background indicates that the domain is not in the aligned region.

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