DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12071 and zld

DIOPT Version :9

Sequence 1:NP_651832.3 Gene:CG12071 / 43660 FlyBaseID:FBgn0039808 Length:581 Species:Drosophila melanogaster
Sequence 2:NP_001285466.1 Gene:zld / 32994 FlyBaseID:FBgn0259789 Length:1596 Species:Drosophila melanogaster


Alignment Length:873 Identity:170/873 - (19%)
Similarity:253/873 - (28%) Gaps:378/873 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 EAHMAVQQQMAQAAIQFKQQQT----------SQQQ-----NSPTANNNNNSQNNGNMQQQQQ-- 61
            :...:.|||:.|...|.:|||.          .|||     :.|.|.::..|.:.|..|||||  
  Fly    81 QQQQSTQQQLQQPQSQQQQQQAMGGGDPQQQQQQQQVTGITHQPYATHHMYSASGGQQQQQQQIY 145

  Fly    62 ------QQQQQQ--------------QQQQQQQQQQHYA-ATIKVPQISSSNVAAAAAGESTFTV 105
                  ..||||              ||||||||...|| .|:.|....|:.|..    ......
  Fly   146 GGLYGGDMQQQQGYASSYINSYEQFYQQQQQQQQGTDYAFGTVGVDYGKSAGVRY----HPYLQT 206

  Fly   106 PDDGMGFEGGVRVLQSLGTWSAAEQLTYNIP-----------KPNLIPFTEPYVEGGSMHPASRL 159
            |..|:|         .:.|.|:|::...:.|           .|.::         .|..|.|..
  Fly   207 PTSGLG---------GIPTASSAQEEAGSAPSAVSTTTAVAMSPRVV---------SSSSPTSTS 253

  Fly   160 KALQQVQQASSGVRKTNPSKSTNKA---FECTVCGKGLARKDKLTIHMRIHTGEKPYICEVCNKA 221
            ..||  ..:|||....:|..:...|   .:|..||.....:.:|..|:....||.||    .:..
  Fly   254 SHLQ--LGSSSGQTPGSPGGAAGSAGCKLQCKKCGILTTNESELQEHIANVHGESPY----GSSG 312

  Fly   222 FARRDKLVIHMNKFKHVTPTNIAP-LGKRLNN------------------MVKKKEQPD------ 261
            :|....:       |...||...| :|....|                  :.::::|.|      
  Fly   313 YASSPYI-------KEEMPTPQPPGVGSATANPGELLDLDSQKMVYHQQLLQQQQQQHDVVAGLP 370

  Fly   262 ----PPPEDNKQSLELQL----QQQAVQVAAQNIIVQSAQGAPTSIP-------GIII------- 304
                |.|..:.||::.:.    :||..|..|      |.:|.|..:.       |:.:       
  Fly   371 LGALPDPLHSMQSMQQRALHSWEQQPQQTVA------SVEGLPPYMQQGLGVGLGVGVDKSPYYS 429

  Fly   305 ----PHHQQQLSWTCELCGRMFSSRDEWSIHAKSHLEYXQPERLVAESTKPAAAAAG-------- 357
                |:||.      ...|.....:.|:..|.....||...:..|.:|..|.|..||        
  Fly   430 PKQSPYHQS------TGVGGATLIKQEYGGHGLIKSEYPDSQHYVDKSFDPTAGGAGGAELCASV 488

  Fly   358 ---------------------------------------------VIAK---------------- 361
                                                         :.||                
  Fly   489 ATSPAEFPSTTTGGPGQEGAAGAAPGGGYRGFEPPSSSSVLPANSLTAKAATWKSNEARRPKTYN 553

  Fly   362 --------TTSSNNSRNYQMDANQNQIQMEAQARKQKIIIQNQ---------------------- 396
                    |:|.:..|:|....::|.::...|.....:.|...                      
  Fly   554 CTACNKWFTSSGHLKRHYNTTLHKNAVKSSGQPDPATLPISAHHHPARDPVTKPSRRGNAAAAAA 618

  Fly   397 ---MILNASHQ-QQQQPQQHP-------------------------------------------Q 414
               ...:||.| |||||...|                                           |
  Fly   619 AAAAAASASGQGQQQQPPIPPPPANVPPPEPPRSPPDYGGGGGLGVGAMGGAAMSQYSASPSPTQ 683

  Fly   415 QQQ-----HQQQ--------------QQQHVAHGKKAARKHQQHLQQQQQQQQQQQQQQQQQQQQ 460
            |||     ||||              .||.|.....|:.:|..:.....|||||||||..|||. 
  Fly   684 QQQHHLNHHQQQANGYANGTANGYGYMQQQVQSTTNASPQHASNNNSNNQQQQQQQQQHHQQQM- 747

  Fly   461 TSAPMYNNN-----------SSSNHNGN-------------NQSQEVSVP--------VSHIIAN 493
               |.::|:           .|:.||.|             |::.....|        ::.....
  Fly   748 ---PQHHNSVLNGHPNGLAGPSAPHNNNTTQMPSSQMRGLLNETTTTPPPTTTTRAPQITTTATT 809

  Fly   494 SPTAATYM-----QAQLSEHASNMQHGMPIVTYNGNQYCVITRAPDLDVEAMQKPLDYGHAAGGA 553
            :.||||.:     |.:.|.|.....|..|  .::.:|                   |..|::..:
  Fly   810 TTTAATTVAIKSEQMEDSNHTHTHTHTHP--NHSHSQ-------------------DRSHSSSSS 853

  Fly   554 TNIIV-MSPMQLLPPQQQQQQPQQQQQQ 580
            :::.. .:..|.|..|:|......|.||
  Fly   854 SSMATEEAEEQELRDQEQADDHLHQHQQ 881

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12071NP_651832.3 zf-C2H2 185..207 CDD:278523 5/21 (24%)
C2H2 Zn finger 187..207 CDD:275368 5/19 (26%)
zf-H2C2_2 200..224 CDD:290200 6/23 (26%)
C2H2 Zn finger 215..232 CDD:275368 1/16 (6%)
zldNP_001285466.1 zf-C2H2_jaz 552..577 CDD:288983 4/24 (17%)
LIM 1328..1389 CDD:259829
C2H2 Zn finger 1328..1349 CDD:275368
C2H2 Zn finger 1357..1377 CDD:275368
C2H2 Zn finger 1386..1407 CDD:275368
zf-H2C2_2 1398..1422 CDD:290200
zf-C2H2 1413..1435 CDD:278523
C2H2 Zn finger 1415..1435 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24393
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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