DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12071 and LOC108183935

DIOPT Version :9

Sequence 1:NP_651832.3 Gene:CG12071 / 43660 FlyBaseID:FBgn0039808 Length:581 Species:Drosophila melanogaster
Sequence 2:XP_017211249.1 Gene:LOC108183935 / 108183935 -ID:- Length:358 Species:Danio rerio


Alignment Length:398 Identity:82/398 - (20%)
Similarity:137/398 - (34%) Gaps:97/398 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 ESTFTVPDDGMGFEGGVRVL-QSLGTWSAAEQLTYNI---PKPNLIPFTEPYVEGGSMHPASRL- 159
            |.||||..:.:..:..:.:| :.....:..|::..::   .||.|...|..........|:... 
Zfish    14 EETFTVKQEDLQEQTDLMLLKEKTHQQNEMEEIQQDMTTDEKPTLTKKTLSRGRHRKSKPSCNFS 78

  Fly   160 -----KALQQVQQASSGVRKTNPSKSTNKAFECTVCGKGLARKDKLTIHMRIHTGEKPYICEVCN 219
                 |:..|..:....:|    ..:..||:.|..|||.......||:||||||||:||.|:.|.
Zfish    79 CKQCGKSFSQKPKLDVHIR----DHTREKAYTCKQCGKSFYNTRNLTVHMRIHTGERPYTCQQCG 139

  Fly   220 KAFARRDKLVIHMNKFKHVTPTNIAPLGK--------RLNNMVKKKEQPDPPPEDNK---QSLEL 273
            |:|.:...|.:||.......|......||        .::..:...|:|...|:..|   |:..|
Zfish   140 KSFHKTGNLTVHMRIHTGERPYTCQQCGKSFQTTGNLTVHMRIHTGEKPYSCPQCGKSYNQNSNL 204

  Fly   274 QLQQQAVQVAAQNIIVQSAQGAPTSIPGIIIPHHQQQLSWTCELCGRMFSSRDEWSIHAKSHL-- 336
            ::..:.                           |....::.|..||:.|:.:....:|.:.|.  
Zfish   205 EVHMRT---------------------------HNGGRTFVCTQCGKSFAQKQNLDLHMRIHTGE 242

  Fly   337 -EYXQPE--------------RLVAESTKP-AAAAAGVIAKTTSSNNSRNYQMDANQNQI----Q 381
             .|...|              .:|....|| |.|..|  ...|...|.||: |:.:...|    .
Zfish   243 KPYTCTECGKSFPYKSTLKHHMIVHTGEKPFACAQCG--KSFTCKANLRNH-MNGHTGTIVFTCD 304

  Fly   382 MEAQARKQKIIIQNQMILNASHQQQQQPQQHPQQQQHQQQQQQHVAHGKKAARKHQQHLQQQQQQ 446
            :..::...|..|:|.|                  :.|..::...:..||  ..||::.|....:.
Zfish   305 LCGKSLTHKYSIKNHM------------------KTHSGERFICIECGK--GFKHKRSLSNHMEL 349

  Fly   447 QQQQQQQQ 454
            ...:|..|
Zfish   350 HNGEQSPQ 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12071NP_651832.3 zf-C2H2 185..207 CDD:278523 9/21 (43%)
C2H2 Zn finger 187..207 CDD:275368 9/19 (47%)
zf-H2C2_2 200..224 CDD:290200 16/23 (70%)
C2H2 Zn finger 215..232 CDD:275368 5/16 (31%)
LOC108183935XP_017211249.1 C2H2 Zn finger 79..99 CDD:275368 3/23 (13%)
C2H2 Zn finger 107..127 CDD:275368 9/19 (47%)
zf-H2C2_2 119..144 CDD:316026 16/24 (67%)
C2H2 Zn finger 135..155 CDD:275368 7/19 (37%)
zf-H2C2_2 147..170 CDD:316026 6/22 (27%)
C2H2 Zn finger 163..183 CDD:275368 2/19 (11%)
COG5048 <187..346 CDD:227381 36/208 (17%)
C2H2 Zn finger 191..211 CDD:275368 4/46 (9%)
C2H2 Zn finger 219..239 CDD:275368 5/19 (26%)
C2H2 Zn finger 247..267 CDD:275368 1/19 (5%)
C2H2 Zn finger 275..295 CDD:275368 7/22 (32%)
C2H2 Zn finger 303..323 CDD:275368 4/37 (11%)
C2H2 Zn finger 330..350 CDD:275368 5/21 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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