DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tll and NR1I2

DIOPT Version :9

Sequence 1:NP_524596.1 Gene:tll / 43656 FlyBaseID:FBgn0003720 Length:452 Species:Drosophila melanogaster
Sequence 2:NP_071285.1 Gene:NR1I2 / 8856 HGNCID:7968 Length:473 Species:Homo sapiens


Alignment Length:467 Identity:102/467 - (21%)
Similarity:167/467 - (35%) Gaps:147/467 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 CKVCRDHSSGKHYGIYACDGCAGFFKRSIRRSRQYVCKSQKQGLCVVDKTHRNQCRACRLRKCFE 98
            |:||.|.::|.|:.:..|:||.|||:|:::|:.:..|..:| |.|.:.:..|.||:|||||||.|
Human    80 CRVCGDKATGYHFNVMTCEGCKGFFRRAMKRNARLRCPFRK-GACEITRKTRRQCQACRLRKCLE 143

  Fly    99 VGMNKDAVQHERG--PRNSTLRRHMAMYKD----AMMGAGEMPQIPAEILMNTAALT-------- 149
            .||.|:.:..:..  .|.:.::|..:....    .:.|..|..::....||:....|        
Human   144 SGMKKEMIMSDEAVEERRALIKRKKSERTGTQPLGVQGLTEEQRMMIRELMDAQMKTFDTTFSHF 208

  Fly   150 ---GFPGVPMPMPGLPQRAGHHPAHMAAFQPPPSAAAV------LDLSVPRVP------------ 193
               ..|||......||:          :.|.|....|.      .||...:|.            
Human   209 KNFRLPGVLSSGCELPE----------SLQAPSREEAAKWSQVRKDLCSLKVSLQLRGEDGSVWN 263

  Fly   194 -HHPVHQGHHGFFSPTAAYMNALATRALPPTPPLMAAEHIKETAAEHLFKN-VNWIKSVRAFTEL 256
             ..|...|....||            .||         |:.:.:. ::||. :::.|.:..|.:|
Human   264 YKPPADSGGKEIFS------------LLP---------HMADMST-YMFKGIISFAKVISYFRDL 306

  Fly   257 PMPDQLLLLEESWKEFFILAMAQYLMPMNFAQLLF--VYESENANRE---IMGMVTREVHAFQEV 316
            |:.||:.||:.:              .....||.|  |:.:|....|   :...:......||::
Human   307 PIEDQISLLKGA--------------AFELCQLRFNTVFNAETGTWECGRLSYCLEDTAGGFQQL 357

  Fly   317 LNQ--------LCHLNIDSTEYECLRAISLFRKSPPSASSTEDLANSSILTGSGSPNSSASAESR 373
            |.:        |..|.:...||..::|||||....|                             
Human   358 LLEPMLKFHYMLKKLQLHEEEYVLMQAISLFSPDRP----------------------------- 393

  Fly   374 GLLESGKVAAMHNDARSALHNYIQRTHPSQPMRFQTLLGVVQLMHKVSSFTIEELFFRKTIGDIT 438
            |:|:...|..:.......|.:||:...|....||                     .|.|.:..:|
Human   394 GVLQHRVVDQLQEQFAITLKSYIECNRPQPAHRF---------------------LFLKIMAMLT 437

  Fly   439 IVRLISDMYSQR 450
            .:|.|:..::||
Human   438 ELRSINAQHTQR 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tllNP_524596.1 NR_DBD_TLX 25..117 CDD:143537 33/84 (39%)
NR_LBD 215..436 CDD:416257 43/234 (18%)
NR1I2NP_071285.1 NR_DBD_PXR 79..166 CDD:143536 33/86 (38%)
NR_LBD_PXR_like 182..467 CDD:132732 67/364 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.