Protein Alignment tll and Rxrg

DIOPT Version :9

• Sequence 1: NP_524596.1
• Gene: tll / 43656
• FlyBaseID: FBgn0003720
• Length: 452
• Species: Drosophila melanogaster
• Sequence 2: XP_038947050.1
• Gene: Rxrg / 83574
• RGDID: 620046
• Length: 464
• Species: Rattus norvegicus
• Alignment Length: 456
• Identity: 121/456 - (26%)
• Similarity: 194/456 - (42%)
• Gaps: 115/456 - (25%)

  Fly     1 MQSSE------GSPDMMDQKYNSVRLSPAASSRILYHVPCKVCRDHSSGKHYGIYACDGCAGFFK 59
            :.|||      |.|.:.:..|.|.  ||.:   ::.|: |.:|.|.|||||||:|:|:||.||||
  Rat   106 VSSSEDIKPLPGLPGIGNMNYPST--SPGS---LVKHI-CAICGDRSSGKHYGVYSCEGCKGFFK 164

  Fly    60 RSIRRSRQYVCKSQKQGLCVVDKTHRNQCRACRLRKCFEVGMNKDAVQHERGPRNSTLRRHMAMY 124
            |:||:...|.|:..|.  |::||..||:|:.||.:||..:||.::|||.||
  Rat   165 RTIRKDLIYTCRDNKD--CLIDKRQRNRCQYCRYQKCLVMGMKREAVQEER-------------- 213

  Fly   125 KDAMMGAGEMPQIPAEILMNTAALTGFPGVPMPMPGLPQRAGHHPAHMAAFQPPPSAAAVLDLSV 189
                ..:.|..:..||     .|.||...:|:      :|.  ..|.:|.   .|...:..|:||
  Rat   214 ----QRSRERAESEAE-----CASTGHEDMPV------ERI--LEAELAV---EPKTESYGDMSV 258

  Fly   190 PRVPHHPVHQGHHGFFSPTAAYMNALATRALPPTPPLMAAEHIKETAAEHLFKNVNWIKSVRAFT 254
            ....:.||                                .:|...|.:.||..|.|.|.:..|:
  Rat   259 ESSTNDPV--------------------------------TNICHAADKQLFTLVEWAKRIPHFS 291

  Fly   255 ELPMPDQLLLLEESWKEFFILAMAQYLMPMN----FAQLLFVYESENANREIMGMVTREVHAFQE 315
            :|.:.||::||...|.|..|.:.:...:.:.    .|..|.|:.| :|:...:|.:. :.....|
  Rat   292 DLTLEDQVILLRAGWNELLIASFSHRSVSVQDGILLATGLHVHRS-SAHSAGVGSIF-DSRVLTE 354

  Fly   316 VLNQLCHLNIDSTEYECLRAISLFRKSPPSASSTEDLANSSILTGSGSPNSSASAESRGLLESGK 380
            :::::..:.:|.:|..|||||.||                             :.:::||....:
  Rat   355 LVSKMKDMRMDKSELGCLRAIVLF-----------------------------NPDAKGLSNPSE 390

  Fly   381 VAAMHNDARSALHNYIQRTHPSQPMRFQTLLGVVQLMHKVSSFTIEELFFRKTIGDITIVRLISD 445
            |..:.....:.|..|.::.:|.||.||..||..:..:..:....:|.|||.|.|||..|...:.:
  Rat   391 VETLREKVYATLEAYTKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLME 455

  Fly   446 M 446
            |
  Rat   456 M 456

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tll	NP_524596.1	NR_DBD_TLX	25..117	CDD:143537	42/91 (46%)
		NR_LBD	215..436	CDD:416257	50/224 (22%)
Rxrg	XP_038947050.1	Nuc_recep-AF1	25..133	CDD:403126	9/28 (32%)
		NR_DBD_RXR	137..213	CDD:143514	40/78 (51%)
		NR_LBD_RXR_like	233..442	CDD:132741	58/282 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X118
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.910