Protein Alignment tll and roraa

DIOPT Version :9

• Sequence 1: NP_524596.1
• Gene: tll / 43656
• FlyBaseID: FBgn0003720
• Length: 452
• Species: Drosophila melanogaster
• Sequence 2: XP_017209577.1
• Gene: roraa / 564951
• ZFINID: ZDB-GENE-060306-2
• Length: 519
• Species: Danio rerio
• Alignment Length: 478
• Identity: 108/478 - (22%)
• Similarity: 186/478 - (38%)
• Gaps: 139/478 - (29%)

  Fly    32 VPCKVCRDHSSGKHYGIYACDGCAGFFKRSIRRSRQYVCKSQKQGLCVVDKTHRNQCRACRLRKC 96
            :|||:|.|.|||.|||:..|:||.|||:||.:.:..|.|..||.  |::|:|.||:|:.|||:||
Zfish    67 IPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNAAYSCPRQKN--CLIDRTSRNRCQHCRLQKC 129

  Fly    97 FEVGMNKDAV------QHERGPRNSTLRRH--MAMYKDAMMGAGEMPQIPAEILMNTAALT---- 149
            ..|||::|||      :.:|....:.:::|  ....:|.....||...:.....::|..||
Zfish   130 LAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQQQRDHQQQPGEAEPLTPTYGLSTNGLTELHD 194

  Fly   150 ---GFPGVPMPMPGLPQRAGHHP------AHMAAF----QPPPSAAAVLDLSVPRVPHHPV--HQ 199
               |:..            ||.|      :.:::|    ||.|..:.   |.:..:...|:  ..
Zfish   195 DLSGYMN------------GHTPDGTKPDSGVSSFYLDIQPSPDQSG---LDINGIKPEPICDFT 244

  Fly   200 GHHGFFSPTAAYMNALATRALPPTPPLMAAEHIKETAAE-HL---------FKNVNW-------- 246
            ...||| |..::.|...:    ||..:...||:.:..:: |:         .:.:.|
Zfish   245 PGSGFF-PYCSFTNGETS----PTVSMAELEHLAQNISKSHMETCQYLREELQQMTWQAFLQEEV 304

  Fly   247 -----------------------------IKSVRAFTELPMPDQLLLLEESWKEFFILAMAQYLM 282
                                         .|.:..|.||...||::||:....|...:.|.:...
Zfish   305 ENYQSKPREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFVRMCRAFD 369

  Fly   283 PMNFAQLLFVYESENANREIMGMVTRE--VHAFQEVLNQLCHLNIDSTEYECLRAISLFRKSPPS 345
            |.|..   ..::.:.|..::...:..:  :.:..|....||.:::...|      |:||
Zfish   370 PQNNT---VYFDGKYAGPDVFKSLGCDDLISSVFEFGKNLCSMHLSEDE------IALF------ 419

  Fly   346 ASSTEDLANSSILTGSGSPNSSASAESRGLLESGKVAAMHNDARSALHNYIQRTHPSQPMRFQTL 410
                    ::.:|         .||:...|.|..||..:....:.||.:.:|:.|....:
Zfish   420 --------SAFVL---------MSADRSWLQEKVKVEKLQQKIQLALQHVLQKNHREDGI----- 462

  Fly   411 LGVVQLMHKVSSFTIEELFFRKT 433
              :.:|:.|||  |:..|..|.|
Zfish   463 --LTKLICKVS--TLRALCSRHT 481

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tll	NP_524596.1	NR_DBD_TLX	25..117	CDD:143537	41/90 (46%)
		NR_LBD	215..436	CDD:416257	45/268 (17%)
roraa	XP_017209577.1	None

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.910