Protein Alignment tll and rorcb

DIOPT Version :9

• Sequence 1: NP_524596.1
• Gene: tll / 43656
• FlyBaseID: FBgn0003720
• Length: 452
• Species: Drosophila melanogaster
• Sequence 2: NP_001264023.1
• Gene: rorcb / 562258
• ZFINID: ZDB-GENE-040724-215
• Length: 480
• Species: Danio rerio
• Alignment Length: 488
• Identity: 107/488 - (21%)
• Similarity: 188/488 - (38%)
• Gaps: 133/488 - (27%)

  Fly    32 VPCKVCRDHSSGKHYGIYACDGCAGFFKRSIRRSRQYVCKSQKQGLCVVDKTHRNQCRACRLRKC 96
            :|||:|.|.|||.|||:..|:||.|||:||.:.:..|.|..|:.  |::|:|:||:|:.|||:||
Zfish     8 IPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRN--CLIDRTNRNRCQHCRLQKC 70

  Fly    97 FEVGMNKDAV------QHERGPRNSTLRRHMAMYKDAMM----------GAGEMPQI---PAEIL 142
            ..:||::|||      :.:|....:.::||..:.:|.:.          ||...|..   .:..|
Zfish    71 LALGMSRDAVKFGRMSKKQRDSLYAEVQRHQQLSQDCLAGLTGRDEAEDGAHSRPYSSGGSSSTL 135

  Fly   143 MNTAALTGFP-GVPMPMPGLPQRAGHHPA------------------HMAAFQPPPSAAAVLDLS 188
            .:...:...| |:...:|..|:.||.:.|                  ..:...|.|||..:.|
Zfish   136 SDLDDIATLPDGLLFDLPLTPEEAGEYCALEMLSSGTGSGGSGSGSSSSSQSSPEPSAVDLAD-- 198

  Fly   189 VPRVPHHPVHQGHHGFFSPTAAYMNALATRALPPTPPLMAAEHIKETAAE-HL------------ 240
            ..||.|.        :..|..:.:......::|....|...|.|.:...: ||
Zfish   199 AVRVKHE--------YIMPDNSRLTHSLLGSIPDNCSLHDIERITQNVVKSHLETCQYSTEELKK 255

  Fly   241 ---------------FKNVNWI-------------------KSVRAFTELPMPDQLLLLEESWKE 271
                           .|:..|:                   |.:..|.||...||::||:....|
Zfish   256 HTWSLYTPEETRSFQLKSAEWMWQQCALQITNAIQYVVEFAKRISGFMELCQNDQIILLKAGCLE 320

  Fly   272 FFILAMAQYLMPMNFAQLLFVYESENANREIMGMVTREVHAFQEVLNQLCHLNIDSTEYECLRAI 336
            ..::.|.:            .|.|.|......|.     .|..::...|...::.:..:|..:::
Zfish   321 VLLIRMCR------------AYNSSNNTMFFDGK-----FASPQLFKALGCDDLVNAVFELAKSL 368

  Fly   337 SLFRKSPPSASSTEDLA--NSSILTGSGSPNSSASAESRGLLESGKVAAMHNDARSALHNYIQRT 399
            |..:      .|.|::|  ::::|.....|..:.|.:.:.|.|...||..|     :||     .
Zfish   369 SRLQ------LSEEEMALYSAAVLLAPDRPWLTESQQVQKLQEKVYVALQH-----SLH-----M 417

  Fly   400 HPSQPMRFQTLLGVVQLMHKVSSFTIEEL-FFR 431
            :.:...:...::..:..|..:.:..|::| |||
Zfish   418 NGATIEKLDKMVSKLPQMKSICNLHIDKLEFFR 450

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tll	NP_524596.1	NR_DBD_TLX	25..117	CDD:143537	39/90 (43%)
		NR_LBD	215..436	CDD:416257	45/267 (17%)
rorcb	NP_001264023.1	NR_DBD_ROR	3..97	CDD:143526	39/90 (43%)
		NR_LBD	230..468	CDD:299703	43/254 (17%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.910