Protein Alignment tll and rorca

DIOPT Version :9

• Sequence 1: NP_524596.1
• Gene: tll / 43656
• FlyBaseID: FBgn0003720
• Length: 452
• Species: Drosophila melanogaster
• Sequence 2: NP_001076288.1
• Gene: rorca / 559245
• ZFINID: ZDB-GENE-990415-250
• Length: 479
• Species: Danio rerio
• Alignment Length: 490
• Identity: 107/490 - (21%)
• Similarity: 196/490 - (40%)
• Gaps: 138/490 - (28%)

  Fly    32 VPCKVCRDHSSGKHYGIYACDGCAGFFKRSIRRSRQYVCKSQKQGLCVVDKTHRNQCRACRLRKC 96
            :|||:|.|.|||.|||:..|:||.|||:||.:.:..|.|..|:.  |::|:|:||:|:.|||:||
Zfish     8 IPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRN--CIIDRTNRNRCQHCRLQKC 70

  Fly    97 FEVGMNKDAV------QHERGPRNSTLRRHMAMYKDA-MMG----------AGE--------MPQ 136
            ..:||::|||      :.:|....:.:::|....:.| .:|          |||        ..:
Zfish    71 LALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQSQERAGGLGNGISSHTGDEAGENGNGHSRAYSR 135

  Fly   137 IPAEILMNTAALTGFP-GVPMPMPGLPQRA---------GHHPAHMAAFQPPPSAAAVLDLSVPR 191
            ..:..|.:...:|..| |:...:|..|:.|         |....:.::.|..|.:        .|
Zfish   136 GSSTTLSDLDDITTLPDGLLFDLPLTPEEAADYCSLELLGGSSGNSSSSQSSPES--------NR 192

  Fly   192 VPHHPVHQGHHGFFSPTAAYMNALATRAL--PPTP-PLMAAEHIKETAAE--------------- 238
            .....|....|.:.||   :.:.|.||::  ||.. .||..|.|.:...:
Zfish   193 QEFGDVTHIKHEYMSP---HESGLFTRSILNPPEGCSLMEIERITQNVIKSHIETSQYSTEELKR 254

  Fly   239 -----------HLFKN---------------------VNWIKSVRAFTELPMPDQLLLLEESWKE 271
                       .:::|                     |.:.|.:..|.:|...||::||:....:
Zfish   255 LAWTLYTPEEIRVYQNKPTEMLWQQCAVQLTNAIQYVVEFAKRISGFMDLSQNDQIILLKAGCLD 319

  Fly   272 FFILAMAQYLMPMNFAQLLFVYESENANREIMGMVTRE--VHAFQEVLNQLCHLNIDSTEYECLR 334
            ..::.|.:...|:|...|   ::.:.|:.::...:..:  |.|..|:...|..|.:...|
Zfish   320 VLLIRMCRAYNPINNTLL---FDGKFASPQLFKALGCDDLVSAVFEMAKTLSRLQLSGEE----- 376

  Fly   335 AISLFRKSPPSASSTEDLANSSILTGSGSPNSSASAESRGLLESGKVAAMHNDARSALHNYIQRT 399
             ::||              .:::|.....|         .|.::.||..:......||.:|:.::
Zfish   377 -MALF--------------TATVLLSPDRP---------WLTDAQKVQKLQEKVYVALQHYLHKS 417

  Fly   400 --HPSQPMRFQTLLGVVQLMHKVSSFTIEEL-FFR 431
              |..:..|   ::..:.:|..:.:..|::| |||
Zfish   418 GVHEEKLAR---MVSKLPMMKSICNLHIDKLEFFR 449

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tll	NP_524596.1	NR_DBD_TLX	25..117	CDD:143537	39/90 (43%)
		NR_LBD	215..436	CDD:416257	47/272 (17%)
rorca	NP_001076288.1	NR_DBD_ROR	3..97	CDD:143526	39/90 (43%)
		NR_LBD	229..467	CDD:299703	40/256 (16%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910