Protein Alignment tll and rxrb

DIOPT Version :9

• Sequence 1: NP_524596.1
• Gene: tll / 43656
• FlyBaseID: FBgn0003720
• Length: 452
• Species: Drosophila melanogaster
• Sequence 2: XP_012823803.1
• Gene: rxrb / 548691
• XenbaseID: XB-GENE-480167
• Length: 456
• Species: Xenopus tropicalis
• Alignment Length: 424
• Identity: 111/424 - (26%)
• Similarity: 173/424 - (40%)
• Gaps: 114/424 - (26%)

  Fly    34 CKVCRDHSSGKHYGIYACDGCAGFFKRSIRRSRQYVCKSQKQGLCVVDKTHRNQCRACRLRKCFE 98
            |.:|.|.|||||||:|:|:||.|||||:||:...|.|:..|.  |:|||..||:|:.||.:||..
 Frog   128 CAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYTCRDNKD--CIVDKRQRNRCQYCRYQKCLA 190

  Fly    99 VGMNKD-------AVQHERGPRNSTLRRHMAMYKDAMMGAGEMPQIPAEILMNTAALTGFPGVPM 156
            .||.::       |||.||       :|......:|........::|.|.::.
 Frog   191 TGMKREVISKYSPAVQEER-------QRGKERDGEAEFSGAINEEMPVEKILE------------ 236

  Fly   157 PMPGLPQRAGHHPAHMAAFQPPPSAAAVLDLSVPRVPHHPVHQGHHGFFSPTAAYMNALATRALP 221
                         |.:|..|..                   .|...|..||:....|
 Frog   237 -------------AELAVEQKS-------------------DQSLEGGGSPSDPVTN-------- 261

  Fly   222 PTPPLMAAEHIKETAAEHLFKNVNWIKSVRAFTELPMPDQLLLLEESWKEFFILAMAQYLMPMN- 285
                      |.:.|.:.||..|.|.|.:..|:|||:.||::||...|.|..|.:.:...:.:.
 Frog   262 ----------ICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSISVKD 316

  Fly   286 ---FAQLLFVYESENANREIMGMVTREVHAFQEVLNQLCHLNIDSTEYECLRAISLFRKSPPSAS 347
               .|..|.|:.: :|:...:|.:...|  ..|:::::..:.:|.||..|||||.||
 Frog   317 GILLATGLHVHRN-SAHSAGVGAIFDRV--LTELVSKMRDMRMDKTELGCLRAIILF-------- 370

  Fly   348 STEDLANSSILTGSGSPNSSASAESRGLLESGKVAAMHNDARSALHNYIQRTHPSQPMRFQTLLG 412
                                 :.:::||...|.|..:.....::|.:|.::.:|.|..||..||.
 Frog   371 ---------------------NPDAKGLSNPGDVEVLREKVYASLESYCKQKYPDQQGRFAKLLL 414

  Fly   413 VVQLMHKVSSFTIEELFFRKTIGDITIVRLISDM 446
            .:..:..:....:|.|||.|.|||..|...:.:|
 Frog   415 RLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEM 448

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tll	NP_524596.1	NR_DBD_TLX	25..117	CDD:143537	42/89 (47%)
		NR_LBD	215..436	CDD:416257	53/224 (24%)
rxrb	XP_012823803.1	Nuc_recep-AF1	13..120	CDD:288658
		NR_DBD_RXR	127..209	CDD:143514	40/82 (49%)
		NR_LBD_RXR_like	228..434	CDD:132741	61/299 (20%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X118
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.000