Protein Alignment tll and rxrgb

DIOPT Version :9

• Sequence 1: NP_524596.1
• Gene: tll / 43656
• FlyBaseID: FBgn0003720
• Length: 452
• Species: Drosophila melanogaster
• Sequence 2: XP_005160723.1
• Gene: rxrgb / 436617
• ZFINID: ZDB-GENE-040718-34
• Length: 465
• Species: Danio rerio
• Alignment Length: 439
• Identity: 119/439 - (27%)
• Similarity: 185/439 - (42%)
• Gaps: 126/439 - (28%)

  Fly    21 SPAASSRILYHVPCKVCRDHSSGKHYGIYACDGCAGFFKRSIRRSRQYVCKSQKQGLCVVDKTHR 85
            ||.:.|:   |: |.:|.|.|||||||:|:|:||.|||||:||:...|.|:..|:  |::||..|
Zfish   132 SPGSLSK---HI-CAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYTCRDIKE--CLIDKRQR 190

  Fly    86 NQCRACRLRKCFEVGMNKDAVQHE--RGPRNS------TLRRHMAMYKDAMMGAGEMPQIPAEIL 142
            |:|:.||.:||..:||.::|||.|  ||...|      |.|.:..|..|.::.|
Zfish   191 NRCQYCRYQKCLAMGMKREAVQEERQRGKEKSDTEVETTSRFNEDMPVDKILDA----------- 244

  Fly   143 MNTAALTGFPGVPMPMPGLPQRAGHHPAHMAAFQPPPSAAAVLDLSV-PRVPHHPVHQGHHGFFS 206
                                                       :||| |:
Zfish   245 -------------------------------------------ELSVEPK--------------- 251

  Fly   207 PTAAYMNALATRALPPTPPLMAAEHIKETAAEHLFKNVNWIKSVRAFTELPMPDQLLLLEESWKE 271
             |..|     |.:.|.........:|...|.:.||..|.|.|.:..|::||:.||::||...|.|
Zfish   252 -TETY-----TESSPSNSTNDPVTNICHAADKQLFTLVEWAKRIPHFSDLPLDDQVILLRAGWNE 310

  Fly   272 FFILAMAQYLMPMNFAQL----LFVYESENANREIMGMVTREVHAFQEVLNQLCHLNIDSTEYEC 332
            ..|.:.:...:.:....|    |.|:.| :|:...:|.:...|  ..|:::::..:.:|.||..|
Zfish   311 LLIASFSHRSITVKDGILLGTGLHVHRS-SAHSAGVGSIFNRV--LTELVSKMKDMQMDKTELGC 372

  Fly   333 LRAISLFRKSPPSASSTEDLANSSILTGSGSPNSSASAESRGLLESGKVAAMHNDARSALHNYIQ 397
            ||||.||                             :.:::||..|.:|.|:.....::|..|.:
Zfish   373 LRAIVLF-----------------------------NPDAKGLSNSLEVEALREKVYASLETYTK 408

  Fly   398 RTHPSQPMRFQTLLGVVQLMHKVSSFTIEELFFRKTIGDITIVRLISDM 446
            :.:|.||.||..||..:..:..:....:|.|||.|.|||..|...:.:|
Zfish   409 QKYPDQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEM 457

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tll	NP_524596.1	NR_DBD_TLX	25..117	CDD:143537	45/99 (45%)
		NR_LBD	215..436	CDD:416257	57/224 (25%)
rxrgb	XP_005160723.1	Nuc_recep-AF1	30..135	CDD:288658	2/2 (100%)
		NR_DBD_RXR	139..215	CDD:143514	40/78 (51%)
		NR_LBD_RXR_like	235..443	CDD:132741	64/314 (20%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X118
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.910