DRSC/TRiP Functional Genomics Resources

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Protein Alignment tll and NR3C2

DIOPT Version :9

Sequence 1:NP_524596.1 Gene:tll / 43656 FlyBaseID:FBgn0003720 Length:452 Species:Drosophila melanogaster
Sequence 2:XP_011530277.1 Gene:NR3C2 / 4306 HGNCID:7979 Length:988 Species:Homo sapiens


Alignment Length:517 Identity:115/517 - (22%)
Similarity:180/517 - (34%) Gaps:168/517 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SEGSP-------DMMDQKYNSVRLSPAASSRILYHVPCKVCRDHSSGKHYGIYACDGCAGFFKRS 61
            |:|.|       ::......||....:..|:|     |.||.|.:||.|||:..|..|..||||:
Human   571 SDGYPVLEYIPENVSSSTLRSVSTGSSRPSKI-----CLVCGDEASGCHYGVVTCGSCKVFFKRA 630

  Fly    62 IRR----SRQYVCKSQKQGLCVVDKTHRNQCRACRLRKCFEVGMNKDAVQHERGPRNSTLRRHMA 122
            :..    ...|:|..:..  |::||..|..|.||||:||.:.|||..|      .::..|.:...
Human   631 VEGKCSWQHNYLCAGRND--CIIDKIRRKNCPACRLQKCLQAGMNLGA------RKSKKLGKLKG 687

  Fly   123 MYKDAMMGAGEMPQIPAEILMNTAALTGFPGVPMPMPGLPQRAGHHPAHMAAFQPPPSAAAVLDL 187
            :::       |.||...            |..|.|.|..|:....:.|  .|.:|..:.|.|..|
Human   688 IHE-------EQPQQQQ------------PPPPPPPPQSPEEGTTYIA--PAKEPSVNTALVPQL 731

  Fly   188 SVPRVPHHPVHQGHHGFFSPTAAYMNALATRALPPTPPLMAAEHI------------KETAAEHL 240
            |.                          .:|||.|: |:|..|:|            |...||:|
Human   732 ST--------------------------ISRALTPS-PVMVLENIEPEIVYAGYDSSKPDTAENL 769

  Fly   241 FKNVN------------WIKSVRAFTELPMPDQLLLLEESWKEFFILAMAQYLMPMNFAQLLF-- 291
            ...:|            |.|.:..|..||:.||:.|::.||......|::........:|.|:  
Human   770 LSTLNRLAGKQMIQVVKWAKVLPGFKNLPLEDQITLIQYSWMCLSSFALSWRSYKHTNSQFLYFA 834

  Fly   292 ---VYESENANREIMGMVTREVHAFQEVLNQLCHLNIDSTEYECLRAISLFRKSPPSASSTEDLA 353
               |:..|..::..|..:.:.:|   ::..|...|.:...||..::.:.|.              
Human   835 PDLVFNEEKMHQSAMYELCQGMH---QISLQFVRLQLTFEEYTIMKVLLLL-------------- 882

  Fly   354 NSSILTGSGSPNSSASAESRGLLESGKVAAMHNDARSALHNYIQRTH------PSQP----MRFQ 408
              |.:...|..:.:|..|.|                   .|||:...      |:..    .||.
Human   883 --STIPKDGLKSQAAFEEMR-------------------TNYIKELRKMVTKCPNNSGQSWQRFY 926

  Fly   409 TLLGVVQLMHKVSSFTIEELFFR-------KTIGDITIVRLISD------------MYSQRK 451
            .|..::..||.:.|..:|..|:.       |......:|.:|||            :|..||
Human   927 QLTKLLDSMHDLVSDLLEFCFYTFRESHALKVEFPAMLVEIISDQLPKVESGNAKPLYFHRK 988

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tllNP_524596.1 NR_DBD_TLX 25..117 CDD:143537 34/95 (36%)
NR_LBD 215..436 CDD:416257 53/266 (20%)
NR3C2XP_011530277.1 NR_DBD_GR_PR 599..677 CDD:143546 34/90 (38%)
NR_LBD_MR 741..988 CDD:132760 54/285 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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