DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tll and Hr51

DIOPT Version :9

Sequence 1:NP_524596.1 Gene:tll / 43656 FlyBaseID:FBgn0003720 Length:452 Species:Drosophila melanogaster
Sequence 2:NP_611032.2 Gene:Hr51 / 36702 FlyBaseID:FBgn0034012 Length:582 Species:Drosophila melanogaster


Alignment Length:531 Identity:157/531 - (29%)
Similarity:232/531 - (43%) Gaps:135/531 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 NSVRLSPAASSRILYHVP-------CKVCRDHSSGKHYGIYACDGCAGFFKRSIRRSRQYVCKSQ 73
            ||:..|.||....:..:.       |.||.|.||||||||.||:||:||||||:||...|.|:: 
  Fly    86 NSMNHSSAAEGSSMTRIKGQNLGLICVVCGDTSSGKHYGILACNGCSGFFKRSVRRKLIYRCQA- 149

  Fly    74 KQGLCVVDKTHRNQCRACRLRKCFEVGMNKDAVQHERGPRNS------TLR--RHMAMYKDAMM- 129
            ..|.|||||.|||||:||||:||.::||||||||:||.|||:      |||  .|....::|.: 
  Fly   150 GTGRCVVDKAHRNQCQACRLKKCLQMGMNKDAVQNERQPRNTATIRPETLREMEHGRALREAAVA 214

  Fly   130 ---------------GAGEMP-----QIPAEILMNTAALTGFPGVPMPMPGLPQRAGHHPAHMAA 174
                           |:|.:|     .:|...|::...||.    .|.:......||..|...||
  Fly   215 VGVFGPPVLLSPPCYGSGLLPPPSLGSLPTGRLLHHNHLTS----SMQLAANHMGAGSFPMFNAA 275

  Fly   175 --FQPPPSAAAVLDLSVP-RVPHHPVHQGHHGFFSPTAAYMNA----------LATRALPPT--- 223
              ...|...|..::::.. .|.|......:|.....:.|..||          .:..:..||   
  Fly   276 GVHHSPKEKAYGMEMATSGNVSHSTNSSSNHSIDPSSPAPENAKEINIAGGSVSSVSSSSPTMEN 340

  Fly   224 ---------------------------------PPLMAAEH--IKETAAEHLFKNVNWIKSVRAF 253
                                             |.|...:|  :.||:|..||..|.|.|::.:|
  Fly   341 DNDDDSIDVTNDNEEPHAVSRSDSSFIMPQFMSPNLYTHQHETVYETSARLLFMAVKWAKNLPSF 405

  Fly   254 TELPMPDQLLLLEESWKEFFILAMAQYLMPMN--FAQLLFVYE-----SENANREIMGMVTRE-- 309
            ..|...||::||||||.|.|:|...|:.:|::  ...|..|.|     ..|||.:.  .:|:|  
  Fly   406 ARLSFRDQVILLEESWSELFLLNAIQWCIPLDPTGCALFSVAEHCNNLENNANGDT--CITKEEL 468

  Fly   310 ---VHAFQEVLNQLCHLNIDSTEYECLRAISLFRKSPPSASSTEDLANSSILTGSGSPNSSASAE 371
               |....|:..:...:.:|..|:.||:||.|||                             .|
  Fly   469 AADVRTLHEIFCKYKAVLVDPAEFACLKAIVLFR-----------------------------PE 504

  Fly   372 SRGLLESGKVAAMHNDARSALHNYIQRTHPSQPMRFQTLLGVVQLMHKVSSFTIEELFFRKTIGD 436
            :|||.:..::..:.:.|...|..:.:....:|..||..||.::.|:..:||..||.::|::|||:
  Fly   505 TRGLKDPAQIENLQDQAHVMLSQHTKTQFTAQIARFGRLLLMLPLLRMISSHKIESIYFQRTIGN 569

  Fly   437 ITIVRLISDMY 447
            ..:.:::.|||
  Fly   570 TPMEKVLCDMY 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tllNP_524596.1 NR_DBD_TLX 25..117 CDD:143537 56/104 (54%)
NR_LBD 215..436 CDD:416257 66/270 (24%)
Hr51NP_611032.2 NR_DBD_PNR 103..194 CDD:143528 56/91 (62%)
NR_LBD_Tlx_PNR_like 354..569 CDD:132748 64/245 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45444766
Domainoid 1 1.000 55 1.000 Domainoid score I7416
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D373206at33208
OrthoFinder 1 1.000 - - FOG0001683
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24083
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X118
76.950

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