DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tll and dsf

DIOPT Version :9

Sequence 1:NP_524596.1 Gene:tll / 43656 FlyBaseID:FBgn0003720 Length:452 Species:Drosophila melanogaster
Sequence 2:NP_001260109.1 Gene:dsf / 33823 FlyBaseID:FBgn0015381 Length:691 Species:Drosophila melanogaster


Alignment Length:717 Identity:174/717 - (24%)
Similarity:238/717 - (33%) Gaps:329/717 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 ASSRILYHVPCKVCRDHSSGKHYGIYACDGCAGFFKRSIRRSRQYVCKS--QKQGLCVVDKTHRN 86
            |..|:| .:|||||.|.|||||||||:||||:|||||||.|:|.|.||:  ..:|.|.|||||||
  Fly     4 AGDRLL-DIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRIYTCKATGDLKGRCPVDKTHRN 67

  Fly    87 QCRACRLRKCFEVGMNKDAVQHERGPRNSTL--------------------------------RR 119
            |||||||.|||:..|||||||||||||...|                                ..
  Fly    68 QCRACRLAKCFQSAMNKDAVQHERGPRKPKLHPQLHHHHHHAAAAAAAAHHAAAAHHHHHHHHHA 132

  Fly   120 HMAMYKDAMMGAGEMP-------QIPAEILMNTAA-------LTGFPGVPMPMP--------GLP 162
            |.|....|.:.|....       .:|..::.|.:|       ::..|..|...|        |..
  Fly   133 HAAAAHHAAVAAAAASGLHHHHHAMPVSLVTNVSASFNYTQHISTHPPAPAAPPSGFHLTASGAQ 197

  Fly   163 Q-------------------RAGHHPAHMAAFQPP--------------------------PS-- 180
            |                   .|.|||.|..|...|                          ||  
  Fly   198 QGPAPPAGHLHHGGAGHQHATAFHHPGHGHALPAPHGGVVSNPGGNSSAISGSGPGSTLPFPSHL 262

  Fly   181 ---------------------AAAVLDLSV----------------------------------- 189
                                 ||.|...|.                                   
  Fly   263 LHHNLIAEAASKLPGITATAVAAVVSSTSTPYASAAQTSSPSSNNHNYSSPSPSNSIQSISSIGS 327

  Fly   190 ---------------PRV--------------------------------PHH------------ 195
                           |||                                |.|            
  Fly   328 RSGGGEEGLSLGSESPRVNVETETPSPSNSPPLSAGSISPAPTLTTSSGSPQHRQMSRHSLSEAT 392

  Fly   196 --PVH-------------------QGHHGFFSPTAAYMNALATRALPPTPP-------------- 225
              |.|                   .|.|    ..::|.:...|...|..||              
  Fly   393 TPPSHASLMICASNNNNNNNNNNNNGEH----KQSSYTSGSPTPTTPTPPPPRSGVGSTCNTASS 453

  Fly   226 -------------------------------------LMAAEHIKETAAEHLFKNVNWIKSVRAF 253
                                                 |::.|.::||.|..||..|.|:|.:..|
  Fly   454 SSGFLELLLSPDKCQELIQYQVQHNTLLFPQQLLDSRLLSWEMLQETTARLLFMAVRWVKCLMPF 518

  Fly   254 TELPMPDQLLLLEESWKEFFILAMAQYLMPMNFAQLLFVYESENANREIM--GMVTREVHAFQEV 316
            ..|...||.|||:|||||.|:|.:||:.:|::...:|   ||......::  .....|:...||:
  Fly   519 QTLSKNDQHLLLQESWKELFLLNLAQWTIPLDLTPIL---ESPLIRERVLQDEATQTEMKTIQEI 580

  Fly   317 LNQLCHLNIDSTEYECLRAISLFRKSPPSASSTEDLANSSILTGSGSPNSSASAESRGLLESGKV 381
            |.:...:..|.:|..|::||:||                             :.|:.||.:...|
  Fly   581 LCRFRQITPDGSEVGCMKAIALF-----------------------------APETAGLCDVQPV 616

  Fly   382 AAMHNDARSALHNYIQRTHPSQPMRFQTLLGVVQLMHKVSSFTIEELFFRKTIGDITIVRLISDM 446
            ..:.:.|:..|.::::..:|.|..||..||.::..:..:.:.|||.|||::|||::.|.||:.||
  Fly   617 EMLQDQAQCILSDHVRLRYPRQATRFGRLLLLLPSLRTIRAATIEALFFKETIGNVPIARLLRDM 681

  Fly   447 YS 448
            |:
  Fly   682 YT 683

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tllNP_524596.1 NR_DBD_TLX 25..117 CDD:143537 65/93 (70%)
NR_LBD 215..436 CDD:416257 65/273 (24%)
dsfNP_001260109.1 NR_DBD_TLX 5..98 CDD:143537 65/93 (70%)
NR_LBD_Tlx_PNR_like 467..671 CDD:132748 61/235 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 55 1.000 Domainoid score I7416
eggNOG 1 0.900 - - E33208_3BC6Q
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 206 1.000 Inparanoid score I2421
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D34630at7147
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24083
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R10591
SonicParanoid 00.000 Not matched by this tool.
77.000

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