Protein Alignment tll and rxrba

DIOPT Version :9

• Sequence 1: NP_524596.1
• Gene: tll / 43656
• FlyBaseID: FBgn0003720
• Length: 452
• Species: Drosophila melanogaster
• Sequence 2: XP_009292297.1
• Gene: rxrba / 30530
• ZFINID: ZDB-GENE-980526-436
• Length: 480
• Species: Danio rerio
• Alignment Length: 453
• Identity: 118/453 - (26%)
• Similarity: 184/453 - (40%)
• Gaps: 122/453 - (26%)

  Fly    20 LSPAASSRILYHVP---------CKVCRDHSSGKHYGIYACDGCAGFFKRSIRRSRQYVCKSQKQ 75
            |.|.:|     |.|         |.:|.|.|||||||:|:|:||.|||||::|:...|.|:..|.
Zfish   116 LKPLSS-----HSPGPMVSQKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLSYTCRDNKD 175

  Fly    76 GLCVVDKTHRNQCRACRLRKCFEVGMNKDAVQHERGPRNSTLRRHMAMYKDAMMGAGEMPQIPAE 140
              |:|||..||:|:.||.:||..:||.::.||.|| .|:....|.....:|            .|
Zfish   176 --CLVDKRQRNRCQYCRYQKCLAMGMKREVVQDER-QRSVQEERQRNKERD------------GE 225

  Fly   141 ILMNTAALTGFPGVPMPMPGLPQRAGHHPAHMAAFQPPPSAAAVLDLSVPRVPHHPVHQGHHGFF 205
            :..::||     ...||:..:.:      |.||..|.....|                .|..|..
Zfish   226 VESSSAA-----NEEMPVEKILE------AEMAVEQKTELHA----------------DGSSGGS 263

  Fly   206 SPTAAYMNALATRALPPTPPLMAAEHIKETAAEHLFKNVNWIKSVRAFTELPMPDQLLLLEESWK 270
            ||.....|                  |.:.|.:.||..|.|.|.:..|:||.:.||::||...|.
Zfish   264 SPNDPVTN------------------ICQAADKQLFTLVEWAKRIPHFSELSLDDQVILLRAGWN 310

  Fly   271 EFFILAMAQYLMPMNFAQLL-----------------FVYESENANREIMGMVTREVHAFQEVLN 318
            |..|.:.:...:.:....||                 .:::.|:|:...:|.:...|  ..|:::
Zfish   311 ELLIASFSHRSITVKDGILLATGLHVHRNSAHSAGVGAIFDRESAHNAEVGAIFDRV--LTELVS 373

  Fly   319 QLCHLNIDSTEYECLRAISLFRKSPPSASSTEDLANSSILTGSGSPNSSASAESRGLLESGKVAA 383
            ::..:.:|.||..|||||.||                             :.:::||....:|..
Zfish   374 KMRDMQMDKTELGCLRAIILF-----------------------------NPDAKGLSSPSEVEL 409

  Fly   384 MHNDARSALHNYIQRTHPSQPMRFQTLLGVVQLMHKVSSFTIEELFFRKTIGDITIVRLISDM 446
            :.....::|..|.::.:|.|..||..||..:..:..:....:|.|||.|.|||..|...:.:|
Zfish   410 LREKVYASLEAYCKQRYPDQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEM 472

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tll	NP_524596.1	NR_DBD_TLX	25..117	CDD:143537	44/100 (44%)
		NR_LBD	215..436	CDD:416257	51/237 (22%)
rxrba	XP_009292297.1	Nuc_recep-AF1	21..126	CDD:288658	5/14 (36%)
		NR_DBD_RXR	133..208	CDD:143514	38/76 (50%)
		NR_LBD_RXR_like	235..458	CDD:132741	61/293 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X118
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	3	2.910