DRSC/TRiP Functional Genomics Resources

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Protein Alignment tll and Nr5a1

DIOPT Version :9

Sequence 1:NP_524596.1 Gene:tll / 43656 FlyBaseID:FBgn0003720 Length:452 Species:Drosophila melanogaster
Sequence 2:NP_001303616.1 Gene:Nr5a1 / 26423 MGIID:1346833 Length:462 Species:Mus musculus


Alignment Length:482 Identity:126/482 - (26%)
Similarity:186/482 - (38%) Gaps:128/482 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 CKVCRDHSSGKHYGIYACDGCAGFFKRSIRRSRQYVCKSQKQGLCVVDKTHRNQCRACRLRKCFE 98
            |.||.|..||.|||:..|:.|.|||||:::.::.|.|...:.  |.:|||.|.:|..||.:||..
Mouse    13 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQS--CKIDKTQRKRCPFCRFQKCLT 75

  Fly    99 VGMNKDAVQHE--RGPRNSTLRRHMAMYK-DAMMGAGEMPQIPAE-ILMNTAALTGFPGVPMPMP 159
            |||..:||:.:  ||.||    :...||| |..:...:..||.|. ..:.|....|.|..|.|.|
Mouse    76 VGMRLEAVRADRMRGGRN----KFGPMYKRDRALKQQKKAQIRANGFKLETGPPMGVPPPPPPPP 136

  Fly   160 G--LPQRAGHHPAHMAAFQPPPS------AAAVLDLSVPRVPHHPVHQGHHGFFSPT-------A 209
            .  ||... |.|...|....|||      .|..|.::||. ||.|:    .|:..|.       :
Mouse   137 DYMLPPSL-HAPEPKALVSGPPSGPLGDFGAPSLPMAVPG-PHGPL----AGYLYPAFSNRTIKS 195

  Fly   210 AYMNALATRALPPTPPLMAAEH-------------------------------IKETA------- 236
            .|....|:....|.||....|.                               ::|.|       
Mouse   196 EYPEPYASPPQQPGPPYSYPEPFSGGPNVPELILQLLQLEPEEDQVRARIVGCLQEPAKSRSDQP 260

  Fly   237 ---------AEHLFKN-VNWIKSVRAFTELPMPDQLLLLEESWKEFFIL----AMAQY------- 280
                     |:..|.: |:|.:....|.||.:.||:.||:..|.|..:|    ...||       
Mouse   261 APFSLLCRMADQTFISIVDWARRCMVFKELEVADQMTLLQNCWSELLVLDHIYRQVQYGKEDSIL 325

  Fly   281 LMPMNFAQLLFVYESENANREIMGMVTREVHAFQEVLNQLCHLNIDSTEYECLRAISLFRKSPPS 345
            |:.....:|..|  :..|...:..:|.|.    ||::.||..|.:|..|:.||:.:.||      
Mouse   326 LVTGQEVELSTV--AVQAGSLLHSLVLRA----QELVLQLHALQLDRQEFVCLKFLILF------ 378

  Fly   346 ASSTEDLANSSILTGSGSPNSSASAESRGLLESGKVAAMHNDARSALHNYIQRTHPSQPMRF-QT 409
            :...:.|.|.|:                       |......|.:||.:|....:|....:| |.
Mouse   379 SLDVKFLNNHSL-----------------------VKDAQEKANAALLDYTLCHYPHCGDKFQQL 420

  Fly   410 LLGVVQLMHKVSSFTIEELFFRKTIGD 436
            ||.:|::  :..|...:|..:.|.:|:
Mouse   421 LLCLVEV--RALSMQAKEYLYHKHLGN 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tllNP_524596.1 NR_DBD_TLX 25..117 CDD:143537 37/84 (44%)
NR_LBD 215..436 CDD:416257 57/280 (20%)
Nr5a1NP_001303616.1 NR_DBD_Lrh-1_like 13..105 CDD:143541 41/97 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 117..149 10/32 (31%)
MISS <147..217 CDD:292450 19/74 (26%)
NR_LBD_SF-1 237..460 CDD:132755 53/246 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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