DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tll and Esrra

DIOPT Version :9

Sequence 1:NP_524596.1 Gene:tll / 43656 FlyBaseID:FBgn0003720 Length:452 Species:Drosophila melanogaster
Sequence 2:XP_006527174.1 Gene:Esrra / 26379 MGIID:1346831 Length:451 Species:Mus musculus


Alignment Length:379 Identity:90/379 - (23%)
Similarity:136/379 - (35%) Gaps:117/379 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 SRQYVCKSQKQGLCVVDKTHRNQCRACRLRKCFEVGMNKDAVQHE--RGPRNSTLRRHMAMYKDA 127
            |.:|.|.:..:  |.:.|..|..|:|||..||..|||.|:.|:.:  ||.|....||        
Mouse   139 SIEYSCPASNE--CEITKRRRKACQACRFTKCLRVGMLKEGVRLDRVRGGRQKYKRR-------- 193

  Fly   128 MMGAGEMPQIPAEILMNTAALTGFPGVPMPMPGLPQRAGHHPAHMAAFQPPPSAAAVLDLSVPRV 192
                   |::.                |:|.|| |..||            |.|.|    ..|| 
Mouse   194 -------PEVD----------------PLPFPG-PFPAG------------PLAVA----GGPR- 217

  Fly   193 PHHPVHQGHHGFFSPTAAYMNALATRALPPTP--------PLMAAEHIKETAA------EHLFKN 243
                           ..|.:|||.:..|...|        |.....|:...|.      ..:...
Mouse   218 ---------------KTAPVNALVSHLLVVEPEKLYAMPDPASPDGHLPAVATLCDLFDREIVVT 267

  Fly   244 VNWIKSVRAFTELPMPDQLLLLEESWKEFFILAMAQYLMPMN----FAQLLFVYESENANREIMG 304
            ::|.||:..|:.|.:.||:.:|:..|.|..:|.:||..:|:.    ||:.| |.:.|.|....:|
Mouse   268 ISWAKSIPGFSSLSLSDQMSVLQSVWMEVLVLGVAQRSLPLQDELAFAEDL-VLDEEGARAAGLG 331

  Fly   305 MVTREVHAFQEVLNQLCHLNIDSTEYECLRAISLFRKSP---PSASSTEDL---ANSSIL---TG 360
            .:..   |..:::.:|..|.::..||..|:|::|.....   ..|.:.|.|   .:.::|   .|
Mouse   332 DLGA---ALLQLVRRLQALRLEREEYVLLKALALANSDSVHIEDAEAVEQLREALHEALLEYEAG 393

  Fly   361 SGSPNSSASAESRGLL---------ESGKVAAMHNDARSALHNYIQRTHPSQPM 405
            ...|...|.....|.|         .:|||.|         |.|..:.....||
Mouse   394 RAGPGGGAERRRAGRLLLTLPLLRQTAGKVLA---------HFYGVKLEGKVPM 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tllNP_524596.1 NR_DBD_TLX 25..117 CDD:143537 20/53 (38%)
NR_LBD 215..436 CDD:416257 52/227 (23%)
EsrraXP_006527174.1 NR_DBD_like <137..197 CDD:383039 23/74 (31%)
NR_LBD_ERR 225..448 CDD:132744 52/227 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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