Protein Alignment tll and nhr-36

DIOPT Version :9

• Sequence 1: NP_524596.1
• Gene: tll / 43656
• FlyBaseID: FBgn0003720
• Length: 452
• Species: Drosophila melanogaster
• Sequence 2: NP_001294717.2
• Gene: nhr-36 / 24104398
• WormBaseID: WBGene00017198
• Length: 435
• Species: Caenorhabditis elegans
• Alignment Length: 485
• Identity: 106/485 - (21%)
• Similarity: 177/485 - (36%)
• Gaps: 154/485 - (31%)

  Fly     1 MQSSEGSPDMMDQKYNSVRLSPAASSRI----LY----------HVPCKVCRDHSSGKHYGIYAC 51
            |..|||..|            |.:||.|    ||          :..|:||..:|:||||.:.||
 Worm     1 MSLSEGEDD------------PCSSSSIYDMSLYGNFAEKSEMSNEMCRVCGKNSAGKHYSVPAC 53

  Fly    52 DGCAGFFKRSIRRSRQY-VCKSQKQGLCVVDK-THRNQCRACRLRKCFEVGMNKDAVQHERGPRN 114
            .||..||:|:|.....| .||..|.....:.: |...:||.|||:||:||||......|
 Worm    54 HGCKSFFRRAIIHKTAYPECKYDKMCFSKISRITRPRKCRYCRLQKCYEVGMVAIVAMH------ 112

  Fly   115 STLRRHMAMYKDAMMGAGEMPQIPAEILMNTAALTGFPGVPMPMP---------GLP-------- 162
               |:|    .|:.:.:.:               :..|.:|:|.|         |:.
 Worm   113 ---RKH----DDSPLRSSD---------------SELPDLPLPSPIATRENYVSGIIDKLHSLDI 155

  Fly   163 -----QRAGHHP---AHMAAFQPPPSAAAVLDLSVPRVPHHPVHQGHHGFFSPTAAYMNAL---- 215
                 :::.::|   .::......|...|:.| ....:|..|:.|..   |:.....||.:
 Worm   156 QTDKFRKSAYNPLFIPNLEGILASPGKLALAD-KYGAMPGWPLTQES---FNEQQILMNQVNGDV 216

  Fly   216 -----ATRALP--PTPPLMAAEHIKETAAEHLFKNVNWIKSVRAFTELPMPDQLLLLEESWKEFF 273
                 ::..||  .||.:    :.|:.....:...:.:.|:...|.:|...|::||.:.:  .|.
 Worm   217 LTDSSSSFVLPTADTPGI----NTKDWLGFDMLTAIEYAKTFPFFQQLESNDKILLTKAT--TFM 275

  Fly   274 ILAMAQYLMPMNFAQLLFVYESENANREI---------MGMVTREVHAFQ-----EVLNQLCHLN 324
            .||:..     |::..|    |:.|..::         :|....|:.:|:     .::..|....
 Worm   276 NLALTS-----NYSSFL----SKMAVLQMPDGICISGPVGQGEHEIRSFERRLSLRIMAPLIRNL 331

  Fly   325 IDSTEYECLRAISLFRKSPPSASSTEDLANSSILTGSGSPNSSASAESRGLLESGKVAAMHNDAR 389
            .|.|||..|:||.|...:....|    .|..:|||                      ...|| ..
 Worm   332 FDRTEYVLLKAIILCNHAVTDLS----CAAQNILT----------------------RERHN-FT 369

  Fly   390 SALHNYIQRTHPSQ--PMRFQTLLGVVQLM 417
            .||..|....|.|.  |.|:.:::.::.::
 Worm   370 GALLLYCLSRHGSHAGPARYYSIINMIDVL 399

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tll	NP_524596.1	NR_DBD_TLX	25..117	CDD:143537	38/107 (36%)
		NR_LBD	215..436	CDD:416257	44/230 (19%)
nhr-36	NP_001294717.2	ZnF_C4	36..105	CDD:197701	30/68 (44%)
		HOLI	242..400	CDD:214658	39/196 (20%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160158233
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.840