DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tll and ESR2

DIOPT Version :9

Sequence 1:NP_524596.1 Gene:tll / 43656 FlyBaseID:FBgn0003720 Length:452 Species:Drosophila melanogaster
Sequence 2:NP_001428.1 Gene:ESR2 / 2100 HGNCID:3468 Length:530 Species:Homo sapiens


Alignment Length:435 Identity:112/435 - (25%)
Similarity:174/435 - (40%) Gaps:111/435 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 CKVCRDHSSGKHYGIYACDGCAGFFKRSIRRSRQYVCKSQKQGLCVVDKTHRNQCRACRLRKCFE 98
            |.||.|::||.|||:::|:||..||||||:....|:|.:..|  |.:||..|..|:|||||||:|
Human   149 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYICPATNQ--CTIDKNRRKSCQACRLRKCYE 211

  Fly    99 VGMNKDAVQHE-------RGPRNSTLRRHMAMYKDAMMGAGEMPQIPAEILMNTAALTGFPGVPM 156
            |||.|...:.|       |..|::..:.|.|  ..|....|..|:: .|:|::            
Human   212 VGMVKCGSRRERCGYRLVRRQRSADEQLHCA--GKAKRSGGHAPRV-RELLLD------------ 261

  Fly   157 PMPGLPQRAGHHPAHMAAFQPPPSAAAVLDLSVPRVPHHPVHQGHHGFFSPTAAYMNALATRALP 221
                             |..|......:|:...|.|                      |.:|   
Human   262 -----------------ALSPEQLVLTLLEAEPPHV----------------------LISR--- 284

  Fly   222 PTPPLMAAE---HIKETAAEHLFKNVNWIKSVRAFTELPMPDQLLLLEESWKEFFILAM----AQ 279
            |:.|...|.   .:.:.|.:.|...::|.|.:..|.||.:.||:.|||..|.|..::.:    ..
Human   285 PSAPFTEASMMMSLTKLADKELVHMISWAKKIPGFVELSLFDQVRLLESCWMEVLMMGLMWRSID 349

  Fly   280 YLMPMNFAQLLFVYESE----NANREIMGMVTREVHAFQEVLNQLCHLNIDSTEYECLRAISLFR 340
            :...:.||..|.:...|    ....||..|:......|:|       |.:...||.|::|:.|..
Human   350 HPGKLIFAPDLVLDRDEGKCVEGILEIFDMLLATTSRFRE-------LKLQHKEYLCVKAMILLN 407

  Fly   341 KSP-PSASSTEDLANSSILTGSGSPNSSASAESRGLLESGKVAAMHNDARSALHNYIQRTHPS-- 402
            .|. |..::|:|                  |:|     |.|:|.:.|....||...|.::..|  
Human   408 SSMYPLVTATQD------------------ADS-----SRKLAHLLNAVTDALVWVIAKSGISSQ 449

  Fly   403 -QPMRFQTLLGVVQLMHKVSSFTIEELFFRKTIGDITIVRLISDM 446
             |.||...||.::..:...|:..:|.|...|....:.:..|:.:|
Human   450 QQSMRLANLLMLLSHVRHASNKGMEHLLNMKCKNVVPVYDLLLEM 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tllNP_524596.1 NR_DBD_TLX 25..117 CDD:143537 41/89 (46%)
NR_LBD 215..436 CDD:416257 57/235 (24%)
ESR2NP_001428.1 Modulating 1..148
ERbeta_N 16..122 CDD:289279
NR_DBD_ER 144..225 CDD:143545 39/77 (51%)
NR_LBD_ER 263..498 CDD:132747 63/287 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 507..530
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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