Protein Alignment tll and nhr-127

DIOPT Version :9

• Sequence 1: NP_524596.1
• Gene: tll / 43656
• FlyBaseID: FBgn0003720
• Length: 452
• Species: Drosophila melanogaster
• Sequence 2: NP_001370055.1
• Gene: nhr-127 / 188480
• WormBaseID: WBGene00003717
• Length: 355
• Species: Caenorhabditis elegans
• Alignment Length: 337
• Identity: 69/337 - (20%)
• Similarity: 121/337 - (35%)
• Gaps: 94/337 - (27%)

  Fly    18 VRLSPAASSRILYHVPCKVCRDHSSGKHYGIYACDGCAGFFKRSIRRSRQYVCKSQKQGLCVVDK 82
            :..||..|      :||:||::.|:|.|:.:.:|..||.||:||:....:|.||..|: .|.:..
 Worm     3 ITFSPELS------IPCEVCKNQSNGYHFEVLSCGACASFFRRSVVSKIKYQCKDGKK-RCQIRY 60

  Fly    83 THRNQCRACRLRKCFEVGMNKDAVQHERGPRNSTLRRHMAMYKDAMMGAGEMPQ-----IPAEIL 142
            ..|:.||.||..||.:.||..:.:|..|.                 :.:...|.     ||:::|
 Worm    61 LDRHFCRYCRFSKCVKAGMKAEKIQKNRD-----------------LDSSPTPTDQNNCIPSDVL 108

  Fly   143 MNTAALTGFPGVPMPMPGLPQRAGHHPAHMAAFQPPPSAAAVLDLSVPRVPHHPVHQGHHGFFSP 207
            .:...|.      ..:.||          ...|.|                 |...:|.......
 Worm   109 HDDGILI------KDIRGL----------FKQFNP-----------------HNASEGCSKLEKL 140

  Fly   208 TAA--YMNALATRALPPTPPLMAAEHIKETAAEHLFKNVNWIKSVRAFTELPMPDQLLLLEESWK 270
            |..  ::.....|........|.:|.:|:...:.:.....|:.....|.:|...:::::||..|.
 Worm   141 TEGLQFIRRNQERECIKIIDEMDSESLKDVQFKVIGSCATWLLFSSFFQKLEENEKVVILERLWH 205

  Fly   271 EFFILAMAQYLMPMNFAQLLFVYESENANREIMGMVTREVHAFQEVLNQLCHLNIDSTEYECLRA 335
            .:.:|                  |..:.:.||.|         .:|:::......|:|   .:|.
 Worm   206 GWTVL------------------EFLSRSLEIFG---------NKVIDEKIVFISDNT---AIRL 240

  Fly   336 ISLFRKSPPSAS 347
            |:.|..|..:||
 Worm   241 ITAFENSLKTAS 252

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tll	NP_524596.1	NR_DBD_TLX	25..117	CDD:143537	31/91 (34%)
		NR_LBD	215..436	CDD:416257	24/133 (18%)
nhr-127	NP_001370055.1	ZnF_C4	12..82	CDD:197701	28/70 (40%)
		Hormone_recep	156..352	CDD:395054	23/127 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910