DRSC/TRiP Functional Genomics Resources

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Protein Alignment tll and Pgr

DIOPT Version :9

Sequence 1:NP_524596.1 Gene:tll / 43656 FlyBaseID:FBgn0003720 Length:452 Species:Drosophila melanogaster
Sequence 2:NP_032855.2 Gene:Pgr / 18667 MGIID:97567 Length:926 Species:Mus musculus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tllNP_524596.1 NR_DBD_TLX 25..117 CDD:143537
NR_LBD 215..436 CDD:416257
PgrNP_032855.2 Modulating, Pro-Rich 1..559
Prog_receptor 1..557 CDD:308007
AF3, mediates transcriptional activation (in isoform B). /evidence=ECO:0000250|UniProtKB:P06401 1..165
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..48
LXXL motif 1. /evidence=ECO:0000250|UniProtKB:P06401 56..60
LXXL motif 1. /evidence=ECO:0000250|UniProtKB:P06401 116..120
Mediates transcriptional transrepression (in isoform A). /evidence=ECO:0000250|UniProtKB:P06401 166..305
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 168..256
Nuclear localization signal. /evidence=ECO:0000255 184..188
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 327..364
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 391..447
AF1, mediates transcriptional activation. /evidence=ECO:0000250|UniProtKB:P06401 453..539
NR_DBD_GR_PR 556..633 CDD:143546
AF2, mediates transcriptional activation. /evidence=ECO:0000250|UniProtKB:P06401 673..926
NR_LBD_PR 679..926 CDD:132759
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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