Protein Alignment tll and nhr-187

DIOPT Version :9

• Sequence 1: NP_524596.1
• Gene: tll / 43656
• FlyBaseID: FBgn0003720
• Length: 452
• Species: Drosophila melanogaster
• Sequence 2: NP_504066.1
• Gene: nhr-187 / 185910
• WormBaseID: WBGene00018542
• Length: 357
• Species: Caenorhabditis elegans
• Alignment Length: 442
• Identity: 97/442 - (21%)
• Similarity: 170/442 - (38%)
• Gaps: 146/442 - (33%)

  Fly     3 SSEGSPDMMDQKYNSVRLSPAASSRILYHVPCKVCRDHSSGKHYGIYACDGCAGFFKRSIRRSRQ 67
            ||..||:|.     ::.|:...:        |.||:..::..::|:.:||.|..||:|::..:.|
 Worm     9 SSSSSPEMF-----ALNLTGQKA--------CVVCKRPANCYNFGVMSCDACKMFFRRTMLLNVQ 60

  Fly    68 YVCKSQKQGLCVVD-----KTHRNQCRACRLRKCFEVGM--NKDA---VQHERGPRNSTLRRHMA 122
            |||:.:.|  |..|     ||  ..||||||.:|.:|||  |..|   |::::....:||...:
 Worm    61 YVCRRKNQ--CFDDSFSCLKT--PYCRACRLVQCVKVGMKLNLSAMLEVKNQKDDAVATLIESL- 120

  Fly   123 MYKDAMMGAG-------EMPQIPAEILMNTAALTGFPGVPMPMPGLPQRAGHHPAHMAAFQPPPS 180
            :|:||.....       |.|.:  |.::.:..||
 Worm   121 LYQDARREKNLMTHFTYENPTL--EDIIESRQLT------------------------------- 152

  Fly   181 AAAVLDLSVPRVPHHPVHQGHHGFFSPTAA--------YMNALATRALPPTPPLMAAEHIKETAA 237
                   .|.|.|.|.:......||....|        :|..|:||    ...|:.|.:  ...|
 Worm   153 -------LVVRDPSHEMTSSDWCFFGAYTAVKFLLGLGFMKKLSTR----DKSLLLANY--SAKA 204

  Fly   238 EHLFKNVNWIKSVRAFTELPMPDQLLLLEESWKEFFILAMAQYLMPMNFAQLLFVYESENANREI 302
            ..||   :.|:::||..:       .:::...|:||:..::|:..        |.....|..|.:
 Worm   205 TLLF---SAIRTMRAKND-------KMIKPDGKDFFVEFLSQWSD--------FSLHYTNRIRSL 251

  Fly   303 MGMVTREVHAFQEVLNQLCHLNIDSTEYECLRAISLFRKSPPSASSTEDLANSSILTGSGSPNSS 367
            :             :|:|..|||.:.|:..:..  ||..:|    :.:||:.|::...:....:.
 Worm   252 L-------------VNRLIELNITNEEFILITV--LFFCNP----ALDDLSESAVAVLTEQQKAY 297

  Fly   368 ASAESRGLLESGKVAAMHNDARSALHNYIQRTHPSQPMRFQTLLGVVQLMHK 419
            .||    |::..|::..||.:                .||..||.:..:.:|
 Worm   298 GSA----LMQYCKLSYQHNGS----------------SRFTELLSLCTVTNK 329

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tll	NP_524596.1	NR_DBD_TLX	25..117	CDD:143537	32/101 (32%)
		NR_LBD	215..436	CDD:416257	41/205 (20%)
nhr-187	NP_504066.1	ZnF_C4	27..98	CDD:197701	29/74 (39%)
		HOLI	169..326	CDD:214658	44/219 (20%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910