Protein Alignment tll and nhr-179

DIOPT Version :9

• Sequence 1: NP_524596.1
• Gene: tll / 43656
• FlyBaseID: FBgn0003720
• Length: 452
• Species: Drosophila melanogaster
• Sequence 2: NP_001256000.1
• Gene: nhr-179 / 184562
• WormBaseID: WBGene00017512
• Length: 440
• Species: Caenorhabditis elegans
• Alignment Length: 483
• Identity: 100/483 - (20%)
• Similarity: 180/483 - (37%)
• Gaps: 113/483 - (23%)

  Fly    21 SPAASSR------------ILYHVPCKVCRDHSSGKHYGIYACDGCAGFFKR---SIRRSRQYVC 70
            ||::||:            .|.|..|:||.....|.|:|.:.|..|:.||:|   |:...|:  |
 Worm     6 SPSSSSQNNSLPSLVELGISLIHEKCRVCDQPGHGFHFGAFTCRACSAFFRRAHFSLVTERK--C 68

  Fly    71 KSQKQGLCVVDKTHRNQCRACRLRKCFEVGMNKDAVQHERGPRNSTLRRHMAMYKDAMMGAGEMP 135
            : ...|.||..|..|..|:.|||.||.|.|||...:|::|....::|.....:.:: |.....:|
 Worm    69 R-LSNGRCVPTKGGRWFCKKCRLAKCSEAGMNSRNIQYDRDANKTSLLSSTNVNRN-MKNKNAIP 131

  Fly   136 QIPAEILMNTAALTGFPGVPMPMPGLPQRAGHHPAHMAAFQPPPSAAAVLDLS--VPRVPHH--- 195
            ...|.|.....:|.|...:.:.:..               :..|:|..|:|:|  |.:..::
 Worm   132 NKFALIYQTVESLLGISNLIILLEN---------------RSEPNACPVVDISLLVDKATNYILN 181

  Fly   196 PVHQGHHGFFS------------PTAAYMNALATRALPPTPPLMAAEHIKETAAEHLFKNVNWI- 247
            ||.....|..|            .::...|.|..:.      :..|:|:|: ..:.:.....|:
 Worm   182 PVLIRKDGDMSNLEQLSLGLQDIQSSQKENVLEKKF------ITIADHMKQ-FEKAMCATAKWLA 239

  Fly   248 --KSVRAFTELPMPDQLLLLEESWKEFFILAMAQYLMPMNFAQLLFVYESENANREIMGMVTREV 310
              |.:::|.:   ..::.:|...|              .|:.:|  .:.:..|...|.|...:|.
 Worm   240 CSKKIQSFDD---DVKIKILRTVW--------------FNWGRL--EHMTATAKMRIRGSCGKEQ 285

  Fly   311 HAFQE--VLNQLCHLNIDST-----EYECLR------------AISLFRKSPPSASSTEDLANSS 356
            ..|..  .|| ..:::||.:     .:|.:|            |||...:..||......|..:.
 Worm   286 LMFSSDTKLN-FGNVHIDLSCFSKYSFEQMRYFFSPNEVYYDEAISKMVEMQPSDIELTYLICAI 349

  Fly   357 ILTGSGSPNSSASAESRGLLESGKVAAMHNDARSALHNYIQRTHPSQPMRFQTLLGVVQLMHKVS 421
            ....:|........|..|.|:....:.:|:       .|.:...|...:|.:.||.:.....|:.
 Worm   350 CFHITGKHFGGDIEEEMGHLQDVLASDLHD-------YYCKNNFPMYLLRLKQLLKIKDTFVKLR 407

  Fly   422 SFTIEELFFRKTIGDITIVRLISDMYSQ 449
            :..:|    :..||.  :.::|:..:||
 Worm   408 NIRLE----KYEIGG--VFKVINMEFSQ 429

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tll	NP_524596.1	NR_DBD_TLX	25..117	CDD:143537	35/106 (33%)
		NR_LBD	215..436	CDD:416257	41/242 (17%)
nhr-179	NP_001256000.1	ZnF_C4	30..99	CDD:197701	27/71 (38%)
		HOLI	227..399	CDD:214658	34/198 (17%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910