Protein Alignment tll and nhr-129

DIOPT Version :9

• Sequence 1: NP_524596.1
• Gene: tll / 43656
• FlyBaseID: FBgn0003720
• Length: 452
• Species: Drosophila melanogaster
• Sequence 2: NP_001122887.1
• Gene: nhr-129 / 183635
• WormBaseID: WBGene00003719
• Length: 420
• Species: Caenorhabditis elegans
• Alignment Length: 470
• Identity: 106/470 - (22%)
• Similarity: 171/470 - (36%)
• Gaps: 139/470 - (29%)

  Fly    34 CKVCRDHSSGKHYGIYACDGCAGFFKRSIRRSRQYVCKSQKQGLCVVDKTHRN---QCRACRLRK 95
            |.||...:||.||.:.||:||..||:|.:...|.:.||....  | .|.:.|:   :|||||:.|
 Worm    30 CFVCGGSASGYHYDVPACNGCKTFFRRYVISKRLFTCKLNDD--C-FDLSTRDVPVKCRACRINK 91

  Fly    96 CFEVGMNKDAVQHERGP----RNSTLRRHM-----AMYKDAMMGAGE------------------ 133
            ||.||||..|::.::..    :..|.|::|     ...|..::.:.|
 Worm    92 CFAVGMNPHALEVDKTNTDCLKEVTKRKNMIGNDAVNEKQLVLNSLESMENKIQKIADMLTYLEL 156

  Fly   134 -MPQIPA-------------EILMNTAALTGFPGVPMPMPGLPQRAGHHPAHMAAFQPPPSAAAV 184
             :.|..|             |.::|:...........||||.|....    :::..:|||.:...
 Worm   157 KLDQFRASSYNPHWAEVRGLEFVLNSTNRISLADKFGPMPGWPLLDN----NLSPSRPPPLSHEK 217

  Fly   185 LDLSVPRVPHHPVHQGHHGFFSPTAAYMNALATRALPPTPPLMAAEHIKETAAEHLFKNVNWIKS 249
            |.:..| .|:.|  :..|..      |.|.|||                          :.:.|:
 Worm   218 LVIGGP-PPYSP--KKKHWL------YFNMLAT--------------------------IEYAKT 247

  Fly   250 VRAFTELPMPDQLLLLEESWKEFFILAMAQYLMPMNFAQLLFVYESENANREIMGMVTREVHAFQ 314
            ...|.||...|||:|:     .:..||....|  ::|:.:     |:..:..:....|.::|..|
 Worm   248 FMFFHELLPRDQLILI-----RYTTLACVNLL--VSFSSV-----SKKYDTAVHPDGTLQMHRNQ 300

  Fly   315 EVLNQ-------LCHLNIDSTEYECLRAISLFRKSPPSASSTEDLANSSILTGSGSPNSSASAES 372
            |..:.       |....:...||..|:||.|...:.|..|....|               ..||.
 Worm   301 EYYSSNVMSIIPLIRYQVQQIEYVLLKAICLCNPAVPDLSKHAQL---------------LLAEE 350

  Fly   373 RGLLESGKVAAMHNDARSALHNYIQRTHPSQPMRFQTLLGVVQLMHKVSSF--TIEELFF----R 431
            |            .....||.::..|...:.|.||..|:|::.::.:....  .:..|:.    .
 Worm   351 R------------QKYSEALLDHCIRNIGNGPSRFTDLIGIIDVLERQQRMQKDLHLLYIAPLVA 403

  Fly   432 KTIGDITIVRLISDM 446
            ||..| .||::|.|:
 Worm   404 KTPKD-NIVQIIEDV 417

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tll	NP_524596.1	NR_DBD_TLX	25..117	CDD:143537	33/89 (37%)
		NR_LBD	215..436	CDD:416257	44/233 (19%)
nhr-129	NP_001122887.1	ZnF_C4	30..99	CDD:197701	31/71 (44%)
		HOLI	236..386	CDD:214658	42/214 (20%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160158224
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.840