Protein Alignment tll and nhr-71

DIOPT Version :9

• Sequence 1: NP_524596.1
• Gene: tll / 43656
• FlyBaseID: FBgn0003720
• Length: 452
• Species: Drosophila melanogaster
• Sequence 2: NP_001024788.1
• Gene: nhr-71 / 181491
• WormBaseID: WBGene00003661
• Length: 581
• Species: Caenorhabditis elegans
• Alignment Length: 511
• Identity: 106/511 - (20%)
• Similarity: 172/511 - (33%)
• Gaps: 165/511 - (32%)

  Fly    11 MDQKYNSVRLSPAASSRILYHVPCKVCRDHSSGKHYGIYACDGCAGFFKRSIRRS---RQYVCKS 72
            |..:|||..              |.||...:.|.|||..:|..|..||:|::...   ::|.||
 Worm     1 MKDEYNSQE--------------CMVCSAPADGLHYGAISCRSCNAFFRRTVVEKALFQEYRCK- 50

  Fly    73 QKQGLCVVDKTHRNQCRACRLRKCFEVGMNKDAVQHERGPRNSTLRRHMAMYKDAMMGAGEMPQI 137
             ....|::|...|..||:||..||.|.||...|||..|.|..|...|     :....|.|||
 Worm    51 -HTNTCLIDPDGRCACRSCRFTKCIEAGMKIGAVQPRRDPTGSQKER-----RKRAGGVGEM--- 106

  Fly   138 PAEILMNTAALT-------------------------GFPGVPMPMPGLPQRA----GHHPAHMA 173
               :.||.:.|.                         ||        ..|:|.    .:.|....
 Worm   107 ---MSMNNSPLERNGNSFSSDGPTSNSFIVDAIRTDYGF--------ATPRRISTDYSNSPDRYR 160

  Fly   174 AF-------QPPPSAAAVLD-LSVPRVPHHPVHQ---------GHHG-----FFSPTAAYM---- 212
            .:       :|.||.::..: .|....|:....|         |.|.     .||....::
 Worm   161 KYVKIELDDEPIPSTSSAPEKQSCQSSPNDDEQQEFNHLVYAFGEHQRMMQLSFSTFEQFLDEHS 225

  Fly   213 NALATRALPPTPPLMAAEHIKETAAEHLFKNVNWIKSVRAFTELPMPDQLLLLEE------SWKE 271
            |....|.:.|.       .:.:.:|..|...:.||:..:.:.|||:.|:..||:.      |...
 Worm   226 NGPKLRRMDPL-------DVSKLSAVELTGLLYWIEKQQPYGELPVEDRSSLLKRYSVRKLSLDH 283

  Fly   272 FF-------ILAMAQYLMPMNFAQLLFVYESENANREIMGMVTREVHAFQE-------------- 315
            |:       ..|..:::| .||.   || .::....|:......::.|.:|
 Worm   284 FYSASKHPEYCARGEFVM-NNFT---FV-PADRTGFELPDDDPHQIQAKREHCRTFAPTFNRFWK 343

  Fly   316 -VLNQLCHLNIDSTEYECLRAISLFRKSPPSASSTEDLANSSILTGSGSPNSSASAESRGLLESG 379
             |:.....:.::..|...|..:.|:                     |.:.|...:.::|.:::..
 Worm   344 NVIRPFVLMKVNDAEVVFLHIMLLW---------------------SVTNNEHVTEDTRKVMKQR 387

  Fly   380 KVAAMHNDARSALHNYIQRTHPSQPMRFQ---TLLGVVQL---MHKVSSFTIEELF 429
            :..||:.    ....|.:......|:||.   .|||.::|   || ...|.:.:||
 Worm   388 RDWAMNR----LFDWYNEHGTSDPPLRFGQMILLLGEIELICDMH-CQDFQVAKLF 438

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tll	NP_524596.1	NR_DBD_TLX	25..117	CDD:143537	33/94 (35%)
		NR_LBD	215..436	CDD:416257	45/249 (18%)
nhr-71	NP_001024788.1	NR_DBD_HNF4A	10..88	CDD:143518	30/79 (38%)
		Hormone_recep	225..431	CDD:278530	43/243 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910