Sequence 1: | NP_524596.1 | Gene: | tll / 43656 | FlyBaseID: | FBgn0003720 | Length: | 452 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_506930.1 | Gene: | nhr-60 / 180059 | WormBaseID: | WBGene00003650 | Length: | 443 | Species: | Caenorhabditis elegans |
Alignment Length: | 466 | Identity: | 101/466 - (21%) |
---|---|---|---|
Similarity: | 157/466 - (33%) | Gaps: | 156/466 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 21 SPAA--SSRILYHVPCKVCRDHSSGKHYGIYACDGCAGFFKRSIRRSRQYVCKSQKQGLCVVDKT 83
Fly 84 HRN---QCRACRLRKCFEVGMNKDAVQ-HERGPRNSTLRR---------------------HMAM 123
Fly 124 YKDAMMGAGEMPQIP---------------------------AEILMNTAALTGFPGVPMPMPGL 161
Fly 162 PQRAGHHPAHMAAFQPPPSAAAVLDLSVPRVPHHPVHQGHHGFFSPTAAYMNALATRALPPTP-- 224
Fly 225 --PLMAAEHIKETAAEHLFKNVNWIKSVRAFTELPMPDQLLLLEESWKEFFILAMAQYLMPMNFA 287
Fly 288 QLLFVYESENANREIM-------GMVTREVHAFQEVLN--QLCHLNIDSTEYECLRAISLFRKSP 343
Fly 344 PSASSTEDLANSSILTGSGSPNSSASAESRGLLESGKVAAMHNDARSALHNYIQRTHPSQPMRFQ 408
Fly 409 TLLGVVQLMHK 419 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
tll | NP_524596.1 | NR_DBD_TLX | 25..117 | CDD:143537 | 34/95 (36%) |
NR_LBD | 215..436 | CDD:416257 | 46/218 (21%) | ||
nhr-60 | NP_506930.1 | ZnF_C4 | 47..117 | CDD:197701 | 30/72 (42%) |
HOLI | 257..409 | CDD:214658 | 41/193 (21%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C160158223 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.840 |